Factsheet for TraesCS5D01G047800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	90.93	84.41
TraesCS5D01G047900.1	Wheat	cytosol	30.4	81.43
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	86.67	73.7
TraesCS5D01G048300.1	Wheat	plastid	64.0	67.99
TraesCS5D01G048000.1	Wheat	cytosol	62.13	67.93
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	60.53	65.42
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	23.73	57.42
TraesCS2D01G458900.1	Wheat	extracellular	20.0	50.68
TraesCS2D01G059700.1	Wheat	cytosol	17.87	49.26
TraesCS2D01G363000.1	Wheat	mitochondrion	48.0	49.18
TraesCS3D01G026900.1	Wheat	cytosol	46.93	48.48
TraesCS3D01G352200.1	Wheat	cytosol	38.13	48.47
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	44.27	47.7
TraesCS7D01G024000.1	Wheat	mitochondrion	44.8	47.06
TraesCS2D01G363600.1	Wheat	cytosol	44.53	46.13
TraesCS7D01G500400.1	Wheat	cytosol	43.2	44.14
TraesCS2D01G544500.1	Wheat	cytosol, plastid	34.67	43.77
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	40.27	43.39
TraesCS7D01G501200.1	Wheat	cytosol	41.87	42.32
TraesCS2D01G544700.1	Wheat	cytosol	36.53	42.15
TraesCS7D01G148800.1	Wheat	cytosol	40.0	42.13
TraesCS3D01G026500.1	Wheat	mitochondrion	41.87	40.78
TraesCS3D01G177000.1	Wheat	cytosol	37.33	40.7
TraesCS2D01G544900.1	Wheat	plastid	29.6	39.64
TraesCS6D01G256000.1	Wheat	cytosol	40.27	39.22
TraesCS2D01G415300.1	Wheat	cytosol	38.4	38.92
TraesCS5D01G462100.1	Wheat	cytosol	36.53	38.27
TraesCS5D01G461700.1	Wheat	cytosol	36.0	37.19
TraesCS2D01G059500.1	Wheat	cytosol	35.2	36.87
TraesCS2D01G472200.1	Wheat	cytosol	33.33	36.76
TraesCS3D01G310900.1	Wheat	cytosol	27.47	36.14
TraesCS7D01G501100.1	Wheat	plastid	27.47	35.4
TraesCS7D01G537000.1	Wheat	cytosol	25.87	34.4
TraesCS6D01G156500.1	Wheat	plastid	30.4	34.13
TraesCS2D01G472300.1	Wheat	cytosol	34.13	33.95
TraesCS7D01G308000.1	Wheat	cytosol	32.27	33.89
TraesCS3D01G513100.1	Wheat	cytosol, plastid	31.47	33.43
TraesCS7D01G307900.1	Wheat	cytosol, plastid	32.53	33.33
TraesCS2D01G470700.1	Wheat	cytosol	31.73	32.96
TraesCS2D01G469800.1	Wheat	plastid	31.2	32.77
TraesCS2D01G472400.1	Wheat	cytosol	30.67	31.59
TraesCS4D01G197600.1	Wheat	cytosol	28.53	30.48
TraesCS4D01G353300.1	Wheat	cytosol	29.07	30.45
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	18.93	29.96
TraesCS7D01G307800.1	Wheat	cytosol	25.6	29.91
TraesCS3D01G214900.1	Wheat	cytosol	19.47	29.32
TraesCS2D01G471800.1	Wheat	cytosol	31.73	28.81
TraesCS5D01G370700.1	Wheat	cytosol	21.07	28.42
TraesCS5D01G474700.1	Wheat	cytosol	17.6	28.33
TraesCS2D01G266900.1	Wheat	cytosol	29.87	28.28
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	32.0	28.24
TraesCS2D01G246900.1	Wheat	cytosol, plastid	30.67	27.0
TraesCS5D01G437400.1	Wheat	cytosol	31.73	25.81
TraesCS2D01G471700.1	Wheat	cytosol	25.33	22.84

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5D01G047800
EnsemblPlants:TraesCS5D01G047800.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr5D:+:45872024..45874518

Molecular Weight (calculated)

41924.7 Da

IEP (calculated)

8.202

GRAVY (calculated)

-0.190

Length

375 amino acids

Sequence
(BLAST)

001: MEGSQSSIAR VPARCTAETQ TSRATVAFEI AGYSLHKGLG RGKYLRSPAF SIGGYEWCIR YYPDGSPDEA SEGYVSVFLK LLTKNAEVRA TYNLMLVEPV
101: KGQSTVVLSS EEPQVFDRER PSWGLRRFMK TTAEGKKGAD VTFKVQGEVF SAHKILLAMR SPVVEAEFYG PLGNKGAQNG HDWLADKNWQ ANIWHFQQVT
201: ALKLAKILLV LRGWLGANQL LDKILVCLPI GKPNFGSKPS SPDITIDDMQ PAVFRAFLHF IYTDSMPPMR DLEEDDKIEM VKHLLVAADK YGMERMKRIC
301: EGMLCKSLDV QTVAAILALA DQHHCSNLKD ACIEFMLSSN RMNDVMASQG YAHLKRYSPD VIVDVFERAA RSCKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.