Factsheet for TraesCS5D01G048300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G047900.1	Wheat	cytosol	33.43	84.29
TraesCS5A01G041400.1	Wheat	plastid	80.45	80.68
TraesCS5B01G043200.1	Wheat	plastid	79.89	80.57
TraesCS5D01G048000.1	Wheat	cytosol	74.79	76.97
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	72.52	73.78
TraesCS5D01G047800.1	Wheat	peroxisome	67.99	64.0
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	25.78	58.71
TraesCS3D01G352200.1	Wheat	cytosol	46.46	55.59
TraesCS7D01G024000.1	Wheat	mitochondrion	54.96	54.34
TraesCS2D01G363000.1	Wheat	mitochondrion	54.96	53.01
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	51.27	52.01
TraesCS3D01G026900.1	Wheat	cytosol	53.26	51.79
TraesCS2D01G363600.1	Wheat	cytosol	51.84	50.55
TraesCS2D01G458900.1	Wheat	extracellular	20.96	50.0
TraesCS7D01G500400.1	Wheat	cytosol	51.84	49.86
TraesCS2D01G544500.1	Wheat	cytosol, plastid	41.93	49.83
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	48.44	49.14
TraesCS2D01G059700.1	Wheat	cytosol	18.7	48.53
TraesCS7D01G501200.1	Wheat	cytosol	50.71	48.25
TraesCS7D01G148800.1	Wheat	cytosol	47.03	46.63
TraesCS2D01G544700.1	Wheat	cytosol	42.78	46.46
TraesCS3D01G177000.1	Wheat	cytosol	43.63	44.77
TraesCS6D01G256000.1	Wheat	cytosol	48.73	44.68
TraesCS5D01G462100.1	Wheat	cytosol	44.76	44.13
TraesCS3D01G026500.1	Wheat	mitochondrion	47.88	43.9
TraesCS2D01G415300.1	Wheat	cytosol	45.33	43.24
TraesCS2D01G544900.1	Wheat	plastid	33.71	42.5
TraesCS5D01G461700.1	Wheat	cytosol	43.06	41.87
TraesCS7D01G501100.1	Wheat	plastid	34.28	41.58
TraesCS2D01G059500.1	Wheat	cytosol	41.64	41.06
TraesCS3D01G310900.1	Wheat	cytosol	33.14	41.05
TraesCS7D01G537000.1	Wheat	cytosol	31.44	39.36
TraesCS2D01G472200.1	Wheat	cytosol	37.68	39.12
TraesCS3D01G214900.1	Wheat	cytosol	27.2	38.55
TraesCS6D01G156500.1	Wheat	plastid	35.98	38.02
TraesCS7D01G307900.1	Wheat	cytosol, plastid	39.38	37.98
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.5	37.97
TraesCS7D01G308000.1	Wheat	cytosol	38.24	37.82
TraesCS5D01G474700.1	Wheat	cytosol	24.36	36.91
TraesCS3D01G513100.1	Wheat	cytosol, plastid	35.41	35.41
TraesCS2D01G469800.1	Wheat	plastid	35.41	35.01
TraesCS2D01G472400.1	Wheat	cytosol	35.98	34.89
TraesCS2D01G470700.1	Wheat	cytosol	35.41	34.63
TraesCS2D01G472300.1	Wheat	cytosol	36.83	34.48
TraesCS4D01G353300.1	Wheat	cytosol	34.56	34.08
TraesCS4D01G197600.1	Wheat	cytosol	33.43	33.62
TraesCS5D01G370700.1	Wheat	cytosol	26.35	33.45
TraesCS2D01G266900.1	Wheat	cytosol	37.11	33.08
TraesCS7D01G307800.1	Wheat	cytosol	29.46	32.4
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	38.24	31.76
TraesCS2D01G246900.1	Wheat	cytosol, plastid	36.83	30.52
TraesCS5D01G437400.1	Wheat	cytosol	38.81	29.72
TraesCS2D01G471800.1	Wheat	cytosol	33.99	29.06
TraesCS2D01G471700.1	Wheat	cytosol	29.46	25.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5D01G048300
EnsemblPlants:TraesCS5D01G048300.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr5D:-:46127094..46128701

Molecular Weight (calculated)

39157.6 Da

IEP (calculated)

5.303

GRAVY (calculated)

0.019

Length

353 amino acids

Sequence
(BLAST)

001: MAASQSSIAM VPSRCTAETH TARGKVAFEI AGYSRLKGLG RGKCLRSSAF SIGGYEWCIR YYPDGCQGEA GDGYVSVFVV LLTKNAEVRA LNNWMLVNGV
101: SGQSIVVLSG KAPRVFDRKM PAWGVPKFMK TTAEVESVYL QNDRLLIECE VNVIKESLDI LVPPSDILDN LATLLEGKIG ADVTFKVQGE VFSAHKILLA
201: MRSAVFNAEF YGPMGDKGAQ DIVIDDMQPA VFKAFLYFIY TDSMPSMDDL EDDDKREMVK HLLVAADKYV MERMKRICEG MLCRVLDVET LGTMLALADQ
301: YHCSNLKDAC VEFMLSSDRM DDVIASQGYL QLKRSSPDII VEVLERAAKS RRI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.