Factsheet for TraesCS7D01G307900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G211100.1	Wheat	cytosol, plastid	98.36	98.63
TraesCS7A01G311400.1	Wheat	cytosol	48.09	96.7
HORVU7Hr1G074420.1	Barley	cytosol	72.13	90.72
TraesCS7D01G308000.1	Wheat	cytosol	60.66	62.18
TraesCS5D01G047900.1	Wheat	cytosol	18.85	49.29
TraesCS2D01G059700.1	Wheat	cytosol	18.31	49.26
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	19.4	45.81
TraesCS5D01G462100.1	Wheat	cytosol	42.35	43.3
TraesCS2D01G059500.1	Wheat	cytosol	41.8	42.74
TraesCS2D01G544500.1	Wheat	cytosol, plastid	34.15	42.09
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	39.89	41.95
TraesCS3D01G352200.1	Wheat	cytosol	33.61	41.69
TraesCS7D01G148800.1	Wheat	cytosol	40.44	41.57
TraesCS5D01G461700.1	Wheat	cytosol	40.98	41.32
TraesCS2D01G363000.1	Wheat	mitochondrion	41.26	41.26
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	38.25	40.35
TraesCS5D01G048000.1	Wheat	cytosol	37.7	40.23
TraesCS7D01G024000.1	Wheat	mitochondrion	39.07	40.06
TraesCS2D01G458900.1	Wheat	extracellular	16.12	39.86
TraesCS3D01G026900.1	Wheat	cytosol	39.34	39.67
TraesCS5D01G048300.1	Wheat	plastid	37.98	39.38
TraesCS6D01G256000.1	Wheat	cytosol	41.26	39.22
TraesCS2D01G544700.1	Wheat	cytosol	34.7	39.08
TraesCS7D01G537000.1	Wheat	cytosol	29.78	38.65
TraesCS7D01G501200.1	Wheat	cytosol	39.07	38.54
TraesCS2D01G363600.1	Wheat	cytosol	37.98	38.4
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	36.07	37.93
TraesCS3D01G177000.1	Wheat	cytosol	35.52	37.79
TraesCS5D01G370700.1	Wheat	cytosol	28.14	37.05
TraesCS2D01G415300.1	Wheat	cytosol	37.43	37.03
TraesCS5D01G474700.1	Wheat	cytosol	23.5	36.91
TraesCS7D01G500400.1	Wheat	cytosol	36.89	36.78
TraesCS3D01G214900.1	Wheat	cytosol	24.86	36.55
TraesCS2D01G544900.1	Wheat	plastid	27.6	36.07
TraesCS3D01G513100.1	Wheat	cytosol, plastid	34.15	35.41
TraesCS4D01G353300.1	Wheat	cytosol	34.15	34.92
TraesCS3D01G026500.1	Wheat	mitochondrion	36.61	34.81
TraesCS3D01G310900.1	Wheat	cytosol	27.05	34.74
TraesCS2D01G470700.1	Wheat	cytosol	34.15	34.63
TraesCS2D01G472400.1	Wheat	cytosol	34.43	34.62
TraesCS4D01G197600.1	Wheat	cytosol	33.06	34.47
TraesCS6D01G156500.1	Wheat	plastid	31.42	34.43
TraesCS7D01G307800.1	Wheat	cytosol	30.05	34.27
TraesCS2D01G472200.1	Wheat	cytosol	31.69	34.12
TraesCS2D01G469800.1	Wheat	plastid	33.06	33.89
TraesCS7D01G501100.1	Wheat	plastid	26.78	33.68
TraesCS5D01G047800.1	Wheat	peroxisome	33.33	32.53
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	21.04	32.49
TraesCS2D01G266900.1	Wheat	cytosol	34.97	32.32
TraesCS2D01G472300.1	Wheat	cytosol	32.24	31.3
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	36.07	31.06
Os08t0128900-00	Rice	cytosol, plastid	30.6	31.02
TraesCS2D01G471800.1	Wheat	cytosol	34.43	30.51
TraesCS2D01G246900.1	Wheat	cytosol, plastid	35.25	30.28
Os03t0792500-02	Rice	cytosol	34.43	29.23
TraesCS5D01G437400.1	Wheat	cytosol	34.97	27.77
TraesCS2D01G471700.1	Wheat	cytosol	30.05	26.44
Os08t0128700-01	Rice	cytosol	0.27	0.27
Os03t0792400-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7D01G307900
EnsemblPlants:TraesCS7D01G307900.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr7D:-:390156146..390157246

Molecular Weight (calculated)

41069.2 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.095

Length

366 amino acids

Sequence
(BLAST)

001: MASTTISSCA YQAVQGAHRL KICQFSHGIV GMDVNADGFI RSSTFRVGGF DWAILYYPEG YGDDSEGFIS VFVEFMSKYG QAPAVVDIRL IDQVTGKPKS
101: LLSSVFFELD EEPFRFKSDS FAEATWGKER CIRREALEDS VYVRDDCLVI ECVITVLGQL RVSETKPLCE IDVPPPNALQ HFRKMLEDTS AADVTFDVQQ
201: ETFAAHRAVL AARSPVFRKQ FGEPMKEKKM SRITINSVEP AVFKALLHFI YTDSLPVMDD FSRAESNAVF QHLLAAADQY GLERLKLMCA RTLVMNLNVE
301: NVASALWLAD KYNCQKLKEA CVNFMAPSNR VDAVVASQGY QLLKRGSPSP LADVWEKRSR ARQSFL

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.