Factsheet for Os03t0792500-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0167200-01	Rice	cytosol	83.53	84.91
Os07t0655300-01	Rice	plastid	54.99	54.61
Os07t0101400-01	Rice	cytosol	48.26	52.66
Os08t0226800-00	Rice	cytosol	33.41	39.67
Os08t0227400-00	Rice	cytosol	20.88	39.47
Os08t0226400-00	Rice	cytosol	32.48	38.36
TraesCS7A01G311400.1	Wheat	cytosol	16.01	37.91
Os04t0625400-00	Rice	plastid	28.07	36.67
Os08t0227200-02	Rice	cytosol	29.23	35.49
Os04t0625600-01	Rice	cytosol	32.02	35.38
HORVU7Hr1G074430.1	Barley	cytosol	29.23	35.29
Os08t0227500-00	Rice	nucleus, plastid	5.8	35.21
Os04t0625500-00	Rice	plastid	30.16	34.67
TraesCS7D01G307900.1	Wheat	cytosol, plastid	29.23	34.43
HORVU7Hr1G074420.1	Barley	cytosol	22.97	34.02
TraesCS7B01G211100.1	Wheat	cytosol, plastid	28.77	33.97
TraesCS7D01G308000.1	Wheat	cytosol	27.61	33.33
Os08t0228200-00	Rice	mitochondrion	30.39	31.41
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	28.07	31.27
Os08t0227100-01	Rice	cytosol	27.38	30.57
Os08t0128900-00	Rice	cytosol, plastid	24.83	29.64
Os08t0129300-00	Rice	cytosol	30.86	25.98
Os03t0792400-01	Rice	plastid	3.48	3.25
Os08t0128700-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4334388	ProteinID:ABF99301.1
EMBL:AK068848	ProteinID:BAF13438.1	ProteinID:BAS86796.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
EnsemblPlantsGene:Os03g0792500	EnsemblPlants:Os03t0792500-02	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411
PANTHER:PTHR24411:SF52	UniProt:Q10C73	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0000DB4EE6	RefSeq:XP_015630597.1	SEG:seg	:

Description

MATH-BTB protein 5, MDC protein with a BTB domain 5, MDC protein having BTB domain 5Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-01);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-02);Similar to Zinc finger POZ domain protein (Fragment). (Os03t0792500-03)

Coordinates

chr3:+:32957958..32964489

Molecular Weight (calculated)

46986.0 Da

IEP (calculated)

5.425

GRAVY (calculated)

-0.294

Length

431 amino acids

Sequence
(BLAST)

001: MEDDDAGGGG GGGEASPPHA GSAAAMAGAG RDIAASPTSS RSVTQTVNGS HRFVIQGYSL AKGMGVGKHI ASETFTVGGY QWAIYFYPDG KNPEDNSAYV
101: SVFIALASEG TDVRALFELT LLDQSGKAKH KVHSHFDRSL ESGPYTLKYR GSMWGYKRFF RRTALETSDF LKDDCLKINC TVGVVVSTMD YSKPHSIHVP
201: ESDIGYHFGT LLDNQEGVDV ICNVAGEKFH AHQLVLAARS SFFRSELFEH ESDEEKNEVD TSNEIKEIVI DDMEPKVFKA VLHFMYRDNL VGDDELSASS
301: SDCSIFDTLA GKLLAAADRY ELPRLRLLCE SYLCKHISVN SVATTLALAD RHHAMELKSV CLKFAAENLS AVIRTDGFDY LKDNCPALQS EILRTVAGCE
401: EECSSGGKSQ SVWGQLSDGG DTSGRRVRPR V

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.