Factsheet for Os08t0227100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227400-00	Rice	cytosol	33.42	56.58
Os08t0227200-02	Rice	cytosol	50.52	54.93
OQU80119	Sorghum	cytosol	51.55	52.51
Os08t0226400-00	Rice	cytosol	45.08	47.67
Os08t0226800-00	Rice	cytosol	40.67	43.25
Os08t0227500-00	Rice	nucleus, plastid	6.99	38.03
Zm00001d024349_P001	Maize	cytosol	33.68	36.21
Os04t0625400-00	Rice	plastid	28.76	33.64
Os08t0228200-00	Rice	mitochondrion	36.27	33.57
Os04t0625500-00	Rice	plastid	32.38	33.33
Os04t0625600-01	Rice	cytosol	33.42	33.08
Os08t0128900-00	Rice	cytosol, plastid	30.05	32.13
Os07t0101400-01	Rice	cytosol	31.09	30.38
Os07t0655300-01	Rice	plastid	33.94	30.18
Os07t0167200-01	Rice	cytosol	31.35	28.54
Os03t0792500-02	Rice	cytosol	30.57	27.38
Os08t0129300-00	Rice	cytosol	36.01	27.15
Os08t0128700-01	Rice	cytosol	1.3	1.35
Os03t0792400-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4344980	EMBL:AK071657
EMBL:AK103481	ProteinID:BAC21428.1	ProteinID:BAF23200.1	ProteinID:BAT04409.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
ProteinID:EAZ41933.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os08g0227100
EnsemblPlants:Os08t0227100-01	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179
UniProt:Q8H4G2	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI00000AD6DF	RefSeq:XP_015648680.1	SEG:seg	:	:	:

Description

Kelch related domain containing protein. (Os08t0227100-01)

Coordinates

chr8:-:7756668..7758169

Molecular Weight (calculated)

42428.5 Da

IEP (calculated)

7.784

GRAVY (calculated)

-0.037

Length

386 amino acids

Sequence
(BLAST)

001: MPSSSSAAAA ACGPPEFTPG WKTVSTCAPD VVGEGVHVFD IFGYSDHKGM GAHEPIRSGA FSVAGLDWVA CLYADGYGVA GIDDVSAYLR LLGDAPTPRV
101: WVSCEVKLVD QRTGVASTPQ PFLRYALAFG DKCKALHCMM IPRGQIEVEP YLVDDRLTME FHVVVRRDPR VSRTARFPRI LVPPPDIKRQ FANLLQSKEG
201: ADVTFDVAGE PFSVHKLVLA MRSPVFKAEL CGLLREPGTQ PITIVDMQPA VFRALLQFIY TDQFPVTRGF ERRDNCEMIR HLLVAADRYA VDRLKLLCQG
301: ILCKNLNVHN VATTLALADQ HQCDKLKDAC IEFMSCSKKM KGVVASKGYE DLQRMAPSVL ADAVAQMSKL NKMSRGSVPQ DESKSC

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.