Factsheet for Os08t0227200-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227400-00	Rice	cytosol	39.72	61.84
Os08t0227100-01	Rice	cytosol	54.93	50.52
OQU80119	Sorghum	cytosol	53.8	50.4
Os08t0226400-00	Rice	cytosol	49.01	47.67
Os08t0226800-00	Rice	cytosol	46.48	45.45
Zm00001d024349_P001	Maize	cytosol	38.03	37.6
Os08t0228200-00	Rice	mitochondrion	43.38	36.93
Os04t0625400-00	Rice	plastid	32.68	35.15
Os04t0625500-00	Rice	plastid	36.34	34.4
Os04t0625600-01	Rice	cytosol	37.46	34.1
Os08t0128900-00	Rice	cytosol, plastid	34.08	33.52
Os07t0101400-01	Rice	cytosol	36.06	32.41
Os07t0655300-01	Rice	plastid	39.44	32.26
Os08t0227500-00	Rice	nucleus, plastid	6.2	30.99
Os07t0167200-01	Rice	cytosol	35.49	29.72
Os03t0792500-02	Rice	cytosol	35.49	29.23
Os08t0129300-00	Rice	cytosol	40.85	28.32
Os08t0128700-01	Rice	cytosol	0.28	0.27
Os03t0792400-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4344981	EMBL:AK069781
ProteinID:BAC21429.1	ProteinID:BAF23201.1	ProteinID:BAT04410.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
EnsemblPlantsGene:Os08g0227200	EnsemblPlants:Os08t0227200-02	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF179	UniProt:Q8H4G1	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI00000AD6E0	RefSeq:XP_015648575.1	:	:	:

Description

Kelch related domain containing protein. (Os08t0227200-02)

Coordinates

chr8:-:7760699..7762222

Molecular Weight (calculated)

39172.3 Da

IEP (calculated)

5.266

GRAVY (calculated)

-0.055

Length

355 amino acids

Sequence
(BLAST)

001: MKRHQMESVP RTVSTVVPNT AEATHVFDIV GYSQMKGRGR EEHVTSGTFV VGGLHWAILL FPDTHVILLD DEEDNVTAFL ELQSQGGSKV RACCDVRLVD
101: QTTGLASSAA PAQPDAKTFK VFNADESNRV SCLKMKRTEF EAPPYLVDDR ITLECVVTVK KEPRVSRARP VPRIKVPPSN MMQQLGDLLE SKEGADVVFD
201: VAGETFPAHK LVLAMRSPVF KAELCGPMRE SGTEPISIVD MQPVVFKALL QFIYTDWLPS IRDLEGDDNS EMIRHLLVAA DRYAVDRLKL LCQSILCKNL
301: RVGNVATTLA LADQHHCGML KDACIEFMSC PNMLDDVVAS QGFVDLENTA PSLVA

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.