Factsheet for Os04t0625500-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G513100.1	Wheat	cytosol, plastid	51.73	54.96
TraesCS4A01G465700.1	Wheat	cytosol	51.2	53.63
TraesCS5A01G528500.1	Wheat	cytosol	45.33	53.63
TraesCS4B01G360400.1	Wheat	cytosol	50.4	53.24
TraesCS5A01G528600.1	Wheat	cytosol	50.4	53.09
HORVU5Hr1G089030.1	Barley	cytosol	50.13	52.96
TraesCS4B01G360000.1	Wheat	cytosol	50.13	52.51
TraesCS5B01G364400.1	Wheat	plastid	51.2	52.46
TraesCS4D01G353300.1	Wheat	cytosol	49.87	52.23
TraesCS4A01G465200.1	Wheat	cytosol	46.93	52.23
TraesCS5A01G554900.1	Wheat	cytosol	49.6	51.81
TraesCS5A01G361900.1	Wheat	cytosol	49.6	51.81
TraesCSU01G034400.1	Wheat	cytosol	49.6	51.67
TraesCS5D01G370700.1	Wheat	cytosol	37.87	51.08
OQU82372	Sorghum	plastid	45.6	50.15
TraesCS2D01G472200.1	Wheat	cytosol	45.33	50.0
TraesCS2A01G472600.1	Wheat	cytosol	45.07	49.71
TraesCS2D01G472300.1	Wheat	cytosol	49.6	49.34
TraesCS4B01G392200.1	Wheat	cytosol	47.2	49.3
OQU82373	Sorghum	cytosol, plastid	44.0	48.67
TraesCS2B01G494600.1	Wheat	cytosol	46.4	47.15
Os04t0625400-00	Rice	plastid	39.47	44.85
Os04t0625600-01	Rice	cytosol	45.87	44.1
Os08t0227400-00	Rice	cytosol	25.87	42.54
TraesCS2D01G471800.1	Wheat	cytosol	45.07	40.92
EES11459	Sorghum	plastid	41.33	40.68
TraesCS2D01G471700.1	Wheat	cytosol	44.0	39.66
TraesCS2A01G471700.1	Wheat	cytosol	44.27	39.62
TraesCSU01G020200.1	Wheat	cytosol	43.2	37.85
Os08t0226800-00	Rice	cytosol	36.53	37.74
TraesCS2A01G471800.1	Wheat	mitochondrion	45.33	37.61
Os08t0226400-00	Rice	cytosol	36.53	37.53
Os08t0227200-02	Rice	cytosol	34.4	36.34
Os07t0101400-01	Rice	cytosol	37.07	35.19
Os08t0227100-01	Rice	cytosol	33.33	32.38
Os08t0128900-00	Rice	cytosol, plastid	30.93	32.13
Os07t0655300-01	Rice	plastid	36.53	31.57
Os07t0167200-01	Rice	cytosol	34.67	30.66
Os08t0228200-00	Rice	mitochondrion	33.6	30.22
Os03t0792500-02	Rice	cytosol	34.67	30.16
Os08t0227500-00	Rice	nucleus, plastid	5.33	28.17
Os08t0129300-00	Rice	cytosol	35.2	25.78
Os08t0128700-01	Rice	cytosol	0.53	0.54
Os03t0792400-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:107275493	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	ProteinID:BAS91110.1
InterPro:BPM_C	InterPro:BTB/POZ_dom	ProteinID:CAE03519.2	ProteinID:CAE04739.1	ProteinID:EAZ32054.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
EnsemblPlantsGene:Os04g0625500	EnsemblPlants:Os04t0625500-00	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	UniProt:Q7XPP6	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00001B171B	RefSeq:XP_015634915.1	:

Description

Similar to OSIGBa0148A10.5 protein. (Os04t0625500-00)

Coordinates

chr4:+:31809708..31810835

Molecular Weight (calculated)

41045.4 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.045

Length

375 amino acids

Sequence
(BLAST)

001: MGNSLFSMAS STASPSDGRS PRLPETLSRC VTASVAAAHN FEVTRYSLLA GVGAGEFVTS GTFSIDGHNW NIQVYPDRWK QEMNAGYVSV FLCLCGGATG
101: VRAKYTLSLS ENGGESVQRS LTHRFDTVGA FWGFPRFMER PRLRQWLLRR GPGGGDDCVT FRCSLTVIRE PRTEGVAAVA VPPSDMRRHM ANMLRGGDGA
201: DVVVLVRDQP FRAHRCVLAA RSPVFRAELF GGGHMRERRT SCVVVDDMEP SIFSAFLHFI YTDSLPENPD TPGDDQDCMA MQHLMVAADR YGLDRLVLIC
301: EEKLCRGIDV QTVATTLALA EQHQRVALKD ACLGFIVSRG VLGAVARTDG FKHLLTTCPS IMVDILDKVA SVMSK

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.