Factsheet for TraesCS4B01G360000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G353300.1	Wheat	cytosol	91.9	91.9
TraesCS4B01G360400.1	Wheat	cytosol	73.74	74.37
TraesCS4B01G392200.1	Wheat	cytosol	73.74	73.54
TraesCS5B01G364400.1	Wheat	plastid	74.02	72.4
OQU82372	Sorghum	plastid	52.23	54.84
OQU82373	Sorghum	cytosol, plastid	49.44	52.21
TraesCS2B01G493600.1	Wheat	cytosol	52.23	51.8
TraesCS2B01G494600.1	Wheat	cytosol	53.07	51.49
TraesCS2B01G492800.1	Wheat	plastid	51.12	50.69
Os04t0625500-00	Rice	plastid	52.51	50.13
TraesCS2B01G493100.1	Wheat	cytosol	51.4	50.0
TraesCS2B01G494000.1	Wheat	cytosol	49.16	49.3
TraesCS2B01G495400.1	Wheat	cytosol	49.44	48.63
TraesCS2B01G493500.1	Wheat	cytosol	48.88	48.48
Os04t0625400-00	Rice	plastid	43.85	47.58
TraesCS2B01G384100.1	Wheat	cytosol	27.37	46.23
TraesCS2B01G496200.1	Wheat	cytosol	43.58	44.57
EES11459	Sorghum	plastid	46.93	44.09
TraesCS2B01G496300.1	Wheat	cytosol	43.58	43.82
TraesCS2B01G383800.1	Wheat	mitochondrion	41.62	41.74
TraesCS5B01G042100.1	Wheat	cytosol	14.8	41.73
TraesCS2B01G496500.1	Wheat	cytosol	40.78	41.71
TraesCS2B01G574000.1	Wheat	cytosol, plastid	28.49	40.96
TraesCS2B01G436900.1	Wheat	peroxisome	17.6	40.91
TraesCS2B01G496400.1	Wheat	cytosol	39.94	40.51
TraesCS2B01G383900.1	Wheat	mitochondrion	41.34	40.22
TraesCS2B01G383700.1	Wheat	mitochondrion	41.06	40.16
TraesCS2B01G074000.1	Wheat	cytosol	37.15	38.89
TraesCS7B01G421900.1	Wheat	cytosol	39.66	38.69
TraesCS2B01G573600.1	Wheat	cytosol	35.2	38.53
TraesCS4B01G122200.1	Wheat	cytosol	39.39	38.42
TraesCS3B01G026400.1	Wheat	cytosol	38.27	37.85
TraesCS7B01G423000.1	Wheat	cytosol, plastid	39.11	37.74
TraesCS7B01G422800.1	Wheat	cytosol, plastid	38.83	37.67
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	36.59	37.64
TraesCS5B01G042300.1	Wheat	plastid	36.87	37.61
TraesCS5B01G472600.1	Wheat	cytosol	37.43	37.53
TraesCS5B01G460600.1	Wheat	cytosol	37.43	37.43
TraesCS3B01G060200.1	Wheat	cytosol	37.71	37.29
TraesCS6B01G303100.1	Wheat	cytosol	37.71	37.19
TraesCS2B01G573200.1	Wheat	cytosol	34.36	37.16
TraesCS5B01G042000.1	Wheat	cytosol	36.31	37.04
TraesCS7B01G422200.1	Wheat	cytosol	36.59	36.49
TraesCS5B01G460400.1	Wheat	cytosol	36.87	36.36
TraesCS5B01G460300.1	Wheat	cytosol	36.87	36.36
TraesCS5B01G472700.1	Wheat	cytosol	35.75	36.26
TraesCS5B01G472400.1	Wheat	cytosol	27.93	36.1
TraesCS5B01G043200.1	Wheat	plastid	35.2	36.0
TraesCS5B01G472500.1	Wheat	cytosol	35.47	35.98
TraesCS5B01G472100.1	Wheat	cytosol	35.47	35.98
TraesCS3B01G507600.1	Wheat	cytosol	29.33	35.84
TraesCS3B01G201600.1	Wheat	cytosol	34.36	35.76
TraesCS7B01G049700.1	Wheat	cytosol	35.47	35.67
TraesCS1B01G387500.1	Wheat	cytosol, plastid	36.03	35.34
TraesCS6B01G443900.1	Wheat	cytosol	34.64	35.33
TraesCS3B01G345600.1	Wheat	cytosol, mitochondrion, plastid	35.75	35.26
TraesCS3B01G345400.1	Wheat	cytosol	35.75	35.07
TraesCS7B01G211100.1	Wheat	cytosol, plastid	34.64	33.97
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	40.22	33.88
TraesCS7B01G422300.1	Wheat	cytosol	34.36	33.42
TraesCS7B01G422500.1	Wheat	cytosol	34.36	33.42
TraesCS3B01G025700.1	Wheat	cytosol	36.03	33.33
TraesCS2B01G573800.1	Wheat	plastid	25.7	33.21
TraesCS7B01G422400.1	Wheat	cytosol	33.24	32.34
TraesCS2B01G262200.1	Wheat	cytosol	38.27	32.16
TraesCS7B01G211200.1	Wheat	cytosol, mitochondrion	33.8	31.27
TraesCS5B01G431400.2	Wheat	cytosol	37.43	30.66
TraesCS7B01G211000.1	Wheat	cytosol	26.26	29.28
TraesCS2B01G493700.2	Wheat	cytosol	40.5	28.16

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4B01G360000	EnsemblPlants:TraesCS4B01G360000.1	TIGR:cd00121	TIGR:cd14736	:

Description

No Description!

Coordinates

chr4B:-:650271960..650273036

Molecular Weight (calculated)

39788.8 Da

IEP (calculated)

7.235

GRAVY (calculated)

-0.086

Length

358 amino acids

Sequence
(BLAST)

001: MGNILTSAIN KPIPETSSRW LTECVTAAHN FEVIKYSLLE GMGSGKFICS SKFSVSGYDW NIRIYPDGAM KEDKAAYMSV FLCFCRGATR DAKVKYTFSL
101: LEKDGKVSNL TDSTYTFSSA SIGQGWTNFI EKSKLKELLS RNDDCFTIRC VLTVIKDHHT EQVGTVPVQV PQSDLHTHFA NMLKGGEGVD VTFSVGDQLF
201: SAHKYVLAAR SSVFKAELFG QMKGTTTKNI KIDDMEPAIF DALLYFIYTD SLPSNFDVDQ NVALQHLLVA ADRYGLERLK AICEEKLCQK FDVQTVATTL
301: ALAEQHHSLQ LKKACLGYLS LQDVLRAVKK TDGFKHLTTS CPSIMMDILD KVAPSSQV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.