CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G528600.1	Wheat	cytosol	56.3	53.93
TraesCS4A01G465700.1	Wheat	cytosol	56.01	53.35
TraesCS4D01G353300.1	Wheat	cytosol	55.72	53.07
TraesCS3D01G513100.1	Wheat	cytosol, plastid	54.84	52.97
TraesCS4B01G360000.1	Wheat	cytosol	54.84	52.23
HORVU5Hr1G089030.1	Barley	cytosol	54.25	52.11
TraesCS4A01G465200.1	Wheat	cytosol	51.32	51.93
TraesCS5A01G528500.1	Wheat	cytosol	47.8	51.42
TraesCSU01G034400.1	Wheat	cytosol	53.96	51.11
TraesCS5B01G364400.1	Wheat	plastid	54.84	51.09
TraesCS4B01G360400.1	Wheat	cytosol	53.08	50.99
OQU82373	Sorghum	cytosol, plastid	50.44	50.74
TraesCS5A01G554900.1	Wheat	cytosol	52.2	49.58
TraesCS5A01G361900.1	Wheat	cytosol	52.2	49.58
TraesCS2D01G472200.1	Wheat	cytosol	49.27	49.41
TraesCS4B01G392200.1	Wheat	cytosol	51.91	49.3
TraesCS5D01G370700.1	Wheat	cytosol	40.18	49.28
TraesCS2A01G472600.1	Wheat	cytosol	48.68	48.82
TraesCS2D01G472300.1	Wheat	cytosol	50.73	45.89
TraesCS2B01G494600.1	Wheat	cytosol	49.56	45.8
Os04t0625500-00	Rice	plastid	50.15	45.6
KXG27151	Sorghum	plastid	50.44	44.56
Os04t0625400-00	Rice	plastid	41.06	42.42
EES11459	Sorghum	plastid	47.21	42.26
TraesCS2D01G471800.1	Wheat	cytosol	47.51	39.23
EES11455	Sorghum	cytosol	35.48	37.35
TraesCS2D01G471700.1	Wheat	cytosol	45.45	37.26
TraesCS2A01G471700.1	Wheat	cytosol	45.75	37.23
TraesCS2A01G471800.1	Wheat	mitochondrion	49.27	37.17
KXG24752	Sorghum	cytosol	17.6	36.36
TraesCSU01G020200.1	Wheat	cytosol	45.45	36.22
OQU80115	Sorghum	cytosol	36.36	35.43
EES14743	Sorghum	cytosol, mitochondrion, plastid	37.24	35.28
KXG24742	Sorghum	mitochondrion	36.95	34.9
EES14728	Sorghum	cytosol	35.48	34.18
OQU80150	Sorghum	plastid	34.6	33.81
EES14736	Sorghum	cytosol	35.19	33.8
EES13596	Sorghum	mitochondrion	34.31	33.72
EES08963	Sorghum	cytosol	37.24	33.42
KXG25976	Sorghum	cytosol	11.73	33.06
OQU80118	Sorghum	cytosol	11.73	32.79
EER97813	Sorghum	plastid	37.54	31.84
EES14737	Sorghum	cytosol	32.55	31.27
EER99824	Sorghum	plastid	37.83	30.28
KXG24756	Sorghum	cytosol	31.38	30.14
EER87831	Sorghum	cytosol	31.09	29.94
KXG24755	Sorghum	mitochondrion	32.84	29.79
KXG24747	Sorghum	cytosol	30.5	29.05
EER99574	Sorghum	cytosol	31.09	29.04
EES13585	Sorghum	cytosol, plastid	32.55	28.76
EER90755	Sorghum	cytosol	35.19	27.97
KXG34465	Sorghum	cytosol	36.07	27.89
OQU80119	Sorghum	cytosol	30.79	27.7
KXG24406	Sorghum	cytosol	28.74	23.33
KXG24338	Sorghum	cytosol	26.98	19.41

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1Z5RF50	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU82372	ProteinID:OQU82372	ProteinID:OQU82372.1	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	EnsemblPlantsGene:SORBI_3006G221900	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B8B9AA4

Description

hypothetical protein

Coordinates

chr6:+:56849951..56851049

Molecular Weight (calculated)

36891.6 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.063

Length

341 amino acids

Sequence
(BLAST)

001: MATDSTSAAA HGQCLSQTSS RCVTGTVTAS HNFEVTNFPM LDGMGIGKFV SSSTFTVGGC DWRIDFYPDG NDAANQGAYV SVFLYFVRGT GGASVTLSFS
101: LLLGNSSEQV TETSARRTFE SAGGDWGFNK LIEKSSLRES LRRLNNHGCF TVRCVLTVRE APRTEDVDAG AVSGEGADVT FSVGDQRLFP AHRCILAARS
201: MVFRAELFGA MKEKDAQRIV IDDMEPAVLI RDSLPDDADN NNNVAMQHLL VAADRYGLDR LRLLCEAKLC RDIDVQTVAT TLALAEQHRC TQLRGACIGF
301: IASRDVLGAA METDGFEHLA TSCPTIMNEI LDKVAAVWSN K

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.