CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99574	Sorghum	cytosol	60.64	62.47
HORVU5Hr1G108760.1	Barley	cytosol	55.85	61.58
TraesCS5D01G462100.1	Wheat	cytosol	57.98	60.89
TraesCS5B01G460600.1	Wheat	cytosol	56.91	59.78
TraesCS2D01G059700.1	Wheat	cytosol	21.54	59.56
EES14736	Sorghum	cytosol	55.59	58.87
TraesCS5A01G462000.1	Wheat	cytosol	27.39	58.86
TraesCS2B01G074000.1	Wheat	cytosol	53.46	58.77
TraesCS5B01G472600.1	Wheat	cytosol	55.59	58.54
TraesCS5A01G452100.1	Wheat	cytosol	20.21	58.46
TraesCS5B01G460300.1	Wheat	cytosol	56.38	58.4
TraesCS5B01G460400.1	Wheat	cytosol	56.38	58.4
EES14737	Sorghum	cytosol	54.52	57.75
TraesCS5A01G451900.1	Wheat	cytosol	55.05	57.66
TraesCS5A01G451500.1	Wheat	cytosol	55.59	57.58
TraesCS5D01G461700.1	Wheat	cytosol	55.59	57.58
TraesCS2D01G059500.1	Wheat	cytosol	54.79	57.54
KXG24756	Sorghum	cytosol	54.26	57.46
TraesCS5B01G472700.1	Wheat	cytosol	53.72	57.22
TraesCS5B01G472500.1	Wheat	cytosol	53.46	56.94
TraesCS5B01G472100.1	Wheat	cytosol	53.46	56.94
TraesCS7B01G049700.1	Wheat	cytosol	53.72	56.74
TraesCS5B01G472400.1	Wheat	cytosol	41.76	56.68
TraesCS7D01G148800.1	Wheat	cytosol	53.19	56.18
HORVU5Hr1G110530.1	Barley	cytosol	36.97	56.05
TraesCS5A01G461800.1	Wheat	cytosol	50.27	55.92
HORVU5Hr1G108800.1	Barley	cytosol	50.53	55.72
TraesCS3B01G507600.1	Wheat	cytosol	43.09	55.29
TraesCS5A01G451600.1	Wheat	cytosol	48.94	52.72
EER87831	Sorghum	cytosol	47.87	50.85
KXG24742	Sorghum	mitochondrion	48.67	50.69
OQU80119	Sorghum	cytosol	50.53	50.13
EES14728	Sorghum	cytosol	45.48	48.31
KXG24747	Sorghum	cytosol	45.74	48.04
OQU80115	Sorghum	cytosol	44.41	47.71
KXG24752	Sorghum	cytosol	20.74	47.27
EES14743	Sorghum	cytosol, mitochondrion, plastid	43.09	45.0
OQU80150	Sorghum	plastid	41.76	44.99
EES13596	Sorghum	mitochondrion	40.96	44.38
OQU80118	Sorghum	cytosol	13.83	42.62
EES13585	Sorghum	cytosol, plastid	41.22	40.16
EES08963	Sorghum	cytosol	38.03	37.63
KXG25976	Sorghum	cytosol	11.44	35.54
KXG27151	Sorghum	plastid	36.17	35.23
OQU82373	Sorghum	cytosol, plastid	31.65	35.1
EES11455	Sorghum	cytosol	29.79	34.57
EER97813	Sorghum	plastid	36.7	34.33
EER99824	Sorghum	plastid	37.77	33.33
OQU82372	Sorghum	plastid	29.79	32.84
EER90755	Sorghum	cytosol	36.97	32.4
KXG24406	Sorghum	cytosol	34.84	31.19
EES11459	Sorghum	plastid	31.12	30.71
KXG34465	Sorghum	cytosol	35.64	30.39
KXG24338	Sorghum	cytosol	35.37	28.06

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PGR5	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG24755	ProteinID:KXG24755	ProteinID:KXG24755.1	InterPro:MATH/TRAF_dom	ProteinID:OQU80121.1
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G081900	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00081AB684
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9721263..9723927

Molecular Weight (calculated)

42143.0 Da

IEP (calculated)

6.665

GRAVY (calculated)

-0.105

Length

376 amino acids

Sequence
(BLAST)

001: MPPLRRFCQF LPRSTPSMAR HVPTPTTAST CTPETAEGRH LFEVTGYSKH RGMGHDKFIR SGNFSVGGHQ WSIRFYPDGF VKGKDYISVY LELMGGSKVR
101: ASCDLKLVDL TTGLSASVHR TEPRMFNSGD VSRYAPQNSS FMERSGFEAS VYLRDDRLVI ECIVTVMAEP KVSATKLRAK IEMPPSDIGN HLGKLLEEEV
201: GADVTFSVGG ETFTAHKLVL AMRSPVFKAE FYGPMRERST QIVTIEDIQP AVFRVLLQFI YTDSLPDMED LVEDVDCEMI RHLLVAADRY ALDRLKLICQ
301: SILAENLNVM TVATTLSLAY QHNCSMLQDV CLEYMTSSNV MDAVVATEGY KYLKTTCPYA LADAFEKTMK LVLQCR

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.