Factsheet for TraesCS2D01G059500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G074000.1	Wheat	cytosol	86.59	90.64
TraesCS2D01G059700.1	Wheat	cytosol	34.08	89.71
TraesCS5D01G462100.1	Wheat	cytosol	63.41	63.41
TraesCS5D01G461700.1	Wheat	cytosol	61.45	60.61
TraesCS5D01G474700.1	Wheat	cytosol	38.27	58.8
Os08t0227400-00	Rice	cytosol	37.15	58.33
EER99574	Sorghum	cytosol	58.1	56.99
EES14737	Sorghum	cytosol	56.42	56.9
TraesCS7D01G148800.1	Wheat	cytosol	55.87	56.18
KXG24755	Sorghum	mitochondrion	57.54	54.79
EES14736	Sorghum	cytosol	54.19	54.65
KXG24756	Sorghum	cytosol	53.91	54.37
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	22.35	51.61
TraesCS2D01G363000.1	Wheat	mitochondrion	50.84	49.73
TraesCS7D01G024000.1	Wheat	mitochondrion	48.6	48.74
TraesCS2D01G363600.1	Wheat	cytosol	48.88	48.34
TraesCS5D01G047900.1	Wheat	cytosol	18.72	47.86
TraesCS2D01G544500.1	Wheat	cytosol, plastid	39.66	47.81
TraesCS3D01G352200.1	Wheat	cytosol	39.11	47.46
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	44.97	46.26
TraesCS6D01G256000.1	Wheat	cytosol	49.72	46.23
TraesCS3D01G177000.1	Wheat	cytosol	44.13	45.93
TraesCS2D01G544700.1	Wheat	cytosol	41.62	45.85
TraesCS2D01G458900.1	Wheat	extracellular	18.72	45.27
TraesCS5D01G048000.1	Wheat	cytosol	43.3	45.19
TraesCS3D01G214900.1	Wheat	cytosol	31.28	44.98
TraesCS3D01G026900.1	Wheat	cytosol	45.53	44.9
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	43.58	44.83
TraesCS2D01G415300.1	Wheat	cytosol	46.09	44.59
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	42.18	43.52
TraesCS6D01G156500.1	Wheat	plastid	40.5	43.41
TraesCS7D01G308000.1	Wheat	cytosol	42.74	42.86
TraesCS2D01G544900.1	Wheat	plastid	33.24	42.5
TraesCS7D01G501200.1	Wheat	cytosol	43.85	42.32
TraesCS7D01G500400.1	Wheat	cytosol	43.02	41.96
TraesCS7D01G307900.1	Wheat	cytosol, plastid	42.74	41.8
TraesCS5D01G048300.1	Wheat	plastid	41.06	41.64
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	26.54	40.08
TraesCS7D01G537000.1	Wheat	cytosol	31.56	40.07
TraesCS5D01G370700.1	Wheat	cytosol	30.73	39.57
TraesCS3D01G026500.1	Wheat	mitochondrion	42.46	39.48
TraesCS3D01G513100.1	Wheat	cytosol, plastid	38.83	39.38
TraesCS3D01G310900.1	Wheat	cytosol	31.28	39.3
TraesCS4D01G353300.1	Wheat	cytosol	39.11	39.11
TraesCS2D01G472200.1	Wheat	cytosol	35.75	37.65
TraesCS2D01G472400.1	Wheat	cytosol	38.27	37.64
TraesCS2D01G469800.1	Wheat	plastid	37.15	37.25
TraesCS7D01G501100.1	Wheat	plastid	29.89	36.77
TraesCS2D01G472300.1	Wheat	cytosol	37.43	35.54
Os08t0227500-00	Rice	nucleus, plastid	6.98	35.21
TraesCS5D01G047800.1	Wheat	peroxisome	36.87	35.2
TraesCS2D01G470700.1	Wheat	cytosol	35.47	35.18
TraesCS4D01G197600.1	Wheat	cytosol	33.8	34.47
TraesCS2D01G266900.1	Wheat	cytosol	37.71	34.09
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	40.22	33.88
TraesCS2D01G471800.1	Wheat	cytosol	37.71	32.69
TraesCS7D01G307800.1	Wheat	cytosol	29.05	32.4
TraesCS2D01G246900.1	Wheat	cytosol, plastid	36.87	30.99
TraesCS5D01G437400.1	Wheat	cytosol	37.15	28.85
TraesCS2D01G471700.1	Wheat	cytosol	32.96	28.37

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2D01G059500	EnsemblPlants:TraesCS2D01G059500.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr2D:-:24751939..24753019

Molecular Weight (calculated)

39873.6 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.255

Length

358 amino acids

Sequence
(BLAST)

001: MEQSKSISMC TPNSVQVTHV FDIFGYSNHR GMGNEKFIRS GTFSVGGHDW SIRFYPDGYS TDKVEKDYIS VYLELMSKGA KVRGSCDLRL VDQSTGMSAS
101: VHKTELRTFD PADLSRFAPQ TSNFKKRGDV ESAFLANDRL TIECIVTVIK DPHVTESKPF PKIEVPVPPS DIAEHIGKLL EDDEGFDVTF CVRRKTIGAH
201: RSILAARSPV FKAELFGPMK EARTPRRVTI KDMQPGVFSA LLHFIYTDSL PDGDKNTDMI QHLLVAADRY AMERLKLACQ SILCENLNMD TVATTWALAD
301: QHSCDKLKDA CLEYIACSNA MDAVVETQGY KNLKVADPSL IVDLLERTTK ACSSSYIG

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.