Factsheet for TraesCS5D01G370700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G361900.1	Wheat	cytosol	91.01	70.47
TraesCS5B01G364400.1	Wheat	plastid	92.45	70.22
HORVU5Hr1G089030.1	Barley	cytosol	86.33	67.61
TraesCS3D01G513100.1	Wheat	cytosol, plastid	73.38	57.79
TraesCS4D01G353300.1	Wheat	cytosol	73.74	57.26
TraesCS2D01G472200.1	Wheat	cytosol	52.16	42.65
TraesCS2D01G472300.1	Wheat	cytosol	55.4	40.85
OQU82373	Sorghum	cytosol, plastid	49.28	40.41
OQU82372	Sorghum	plastid	49.28	40.18
TraesCS2D01G469800.1	Wheat	plastid	49.64	38.66
TraesCS2D01G472400.1	Wheat	cytosol	50.36	38.46
TraesCS2D01G470700.1	Wheat	cytosol	49.28	37.95
Os04t0625500-00	Rice	plastid	51.08	37.87
Os04t0625400-00	Rice	plastid	44.24	37.27
TraesCS2D01G471800.1	Wheat	cytosol	52.88	35.59
TraesCS2D01G471700.1	Wheat	cytosol	51.08	34.13
TraesCS2D01G544500.1	Wheat	cytosol, plastid	35.61	33.33
TraesCS3D01G214900.1	Wheat	cytosol	29.14	32.53
TraesCS5D01G474700.1	Wheat	cytosol	26.98	32.19
EES11459	Sorghum	plastid	43.88	32.02
TraesCS2D01G544700.1	Wheat	cytosol	36.69	31.38
TraesCS4D01G197600.1	Wheat	cytosol	39.57	31.34
TraesCS2D01G059500.1	Wheat	cytosol	39.57	30.73
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.54	29.96
TraesCS7D01G501100.1	Wheat	plastid	31.3	29.9
TraesCS7D01G308000.1	Wheat	cytosol	37.77	29.41
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	35.97	28.82
TraesCS2D01G363000.1	Wheat	mitochondrion	37.77	28.69
TraesCS6D01G256000.1	Wheat	cytosol	39.21	28.31
TraesCS7D01G307900.1	Wheat	cytosol, plastid	37.05	28.14
TraesCS7D01G024000.1	Wheat	mitochondrion	35.97	28.01
TraesCS2D01G363600.1	Wheat	cytosol	36.33	27.9
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	34.89	27.87
TraesCS7D01G501200.1	Wheat	cytosol	37.05	27.76
TraesCS3D01G310900.1	Wheat	cytosol	28.42	27.72
TraesCS3D01G177000.1	Wheat	cytosol	34.17	27.62
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	34.53	27.59
TraesCS7D01G148800.1	Wheat	cytosol	35.25	27.53
TraesCS5D01G461700.1	Wheat	cytosol	35.61	27.27
TraesCS3D01G026900.1	Wheat	cytosol	35.61	27.27
TraesCS2D01G544900.1	Wheat	plastid	27.34	27.14
TraesCS5D01G462100.1	Wheat	cytosol	34.89	27.09
TraesCS7D01G500400.1	Wheat	cytosol	35.61	26.98
TraesCS6D01G156500.1	Wheat	plastid	32.37	26.95
TraesCS2D01G415300.1	Wheat	cytosol	35.61	26.76
TraesCS5D01G048300.1	Wheat	plastid	33.45	26.35
TraesCS5D01G048000.1	Wheat	cytosol	32.37	26.24
TraesCS3D01G352200.1	Wheat	cytosol	27.7	26.1
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	38.85	25.41
TraesCS2D01G246900.1	Wheat	cytosol, plastid	37.77	24.65
TraesCS2D01G266900.1	Wheat	cytosol	34.53	24.24
TraesCS2D01G059700.1	Wheat	cytosol	11.51	23.53
TraesCS7D01G537000.1	Wheat	cytosol	23.74	23.4
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	12.59	22.58
TraesCS3D01G026500.1	Wheat	mitochondrion	30.94	22.34
TraesCS5D01G437400.1	Wheat	cytosol	36.33	21.91
TraesCS7D01G307800.1	Wheat	cytosol	24.82	21.5
TraesCS5D01G047800.1	Wheat	peroxisome	28.42	21.07
TraesCS5D01G047900.1	Wheat	cytosol	8.63	17.14
TraesCS2D01G458900.1	Wheat	extracellular	8.27	15.54

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5D01G370700
EnsemblPlants:TraesCS5D01G370700.1	TIGR:cd00121	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:445381897..445382733

Molecular Weight (calculated)

31107.9 Da

IEP (calculated)

5.358

GRAVY (calculated)

-0.159

Length

278 amino acids

Sequence
(BLAST)

001: MANNFTSSVN KPITETSSRC LTESITTAHN FEVTSYSLLQ GMGAGKFISS NTFNVSGYGW NIRIYPDGLK EGTDAYMSAF LCFCSGTTDA KVKFTFSLLE
101: KDRKVNKLES ATNTFTPVGG TWGWENFIAN NKLKELLSCN DDCFTIRCVL TVFKEPRIED STVIVPVPQS DLHTHFANML KDGEGMDVTF SVRDQLFNAH
201: RCVLAARSSV FKAELFGEMK ETTMKHVKID DMEPSIFEAL LHFIYTDTLP SNCEVDQNVA LQHLLVAADR YGLDRGYL

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.