Factsheet for Os04t0625400-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G472600.1	Wheat	cytosol	50.0	48.53
TraesCS2D01G472200.1	Wheat	cytosol	49.7	48.24
TraesCS4A01G465700.1	Wheat	cytosol	50.61	46.65
TraesCS5A01G528600.1	Wheat	cytosol	50.3	46.63
TraesCS4A01G465200.1	Wheat	cytosol	47.27	46.29
TraesCS5A01G528500.1	Wheat	cytosol	43.33	45.11
TraesCSU01G034400.1	Wheat	cytosol	49.09	45.0
TraesCS4B01G360400.1	Wheat	cytosol	47.88	44.51
TraesCS3D01G513100.1	Wheat	cytosol, plastid	47.58	44.48
TraesCS5A01G554900.1	Wheat	cytosol	48.18	44.29
TraesCS5D01G370700.1	Wheat	cytosol	37.27	44.24
TraesCS4B01G360000.1	Wheat	cytosol	47.58	43.85
HORVU5Hr1G089030.1	Barley	cytosol	46.97	43.66
TraesCS4D01G353300.1	Wheat	cytosol	46.97	43.3
OQU82373	Sorghum	cytosol, plastid	43.94	42.77
TraesCS5B01G364400.1	Wheat	plastid	46.97	42.35
TraesCS5A01G361900.1	Wheat	cytosol	46.06	42.34
TraesCS4B01G392200.1	Wheat	cytosol	46.06	42.34
Os04t0625600-01	Rice	cytosol	49.7	42.05
TraesCS2D01G472300.1	Wheat	cytosol	47.58	41.64
OQU82372	Sorghum	plastid	42.42	41.06
Os08t0227400-00	Rice	cytosol	27.88	40.35
Os04t0625500-00	Rice	plastid	44.85	39.47
TraesCS2B01G494600.1	Wheat	cytosol	43.33	38.75
EES11459	Sorghum	plastid	41.52	35.96
TraesCS2D01G471800.1	Wheat	cytosol	43.94	35.11
Os08t0226400-00	Rice	cytosol	37.88	34.25
Os08t0226800-00	Rice	cytosol	37.58	34.16
Os08t0227200-02	Rice	cytosol	35.15	32.68
TraesCS2A01G471800.1	Wheat	mitochondrion	43.64	31.86
Os08t0227500-00	Rice	nucleus, plastid	6.67	30.99
TraesCS2A01G471700.1	Wheat	cytosol	39.09	30.79
TraesCS2D01G471700.1	Wheat	cytosol	38.79	30.77
Os07t0167200-01	Rice	cytosol	38.48	29.95
TraesCSU01G020200.1	Wheat	cytosol	38.79	29.91
Os07t0101400-01	Rice	cytosol	35.15	29.37
Os07t0655300-01	Rice	plastid	38.48	29.26
Os08t0227100-01	Rice	cytosol	33.64	28.76
Os03t0792500-02	Rice	cytosol	36.67	28.07
Os08t0228200-00	Rice	mitochondrion	35.15	27.82
Os08t0128900-00	Rice	cytosol, plastid	29.7	27.15
Os08t0129300-00	Rice	cytosol	34.55	22.27
Os08t0128700-01	Rice	cytosol	1.21	1.08
Os03t0792400-01	Rice	plastid	0.91	0.65

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0P0WEY4	ProteinID:BAS91109.1
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os04g0625400	EnsemblPlants:Os04t0625400-00	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000393A82A	SEG:seg	:

Description

Similar to OSIGBa0148A10.4 protein. (Os04t0625400-00)

Coordinates

chr4:+:31801895..31803232

Molecular Weight (calculated)

36208.5 Da

IEP (calculated)

7.526

GRAVY (calculated)

-0.089

Length

330 amino acids

Sequence
(BLAST)

001: MTRPPVPFLS MPPMASSSTS SRCLTASVTG THNLEVTSYS LLEGMGVGKF VSSTTFSVAG YDWNLRFYPD GITDNDRKEG YGAVWMLASR AGSDCRIARF
101: VKKSDLQEHA IRRIRFTGND SFKIECSLTV ISESRAEDVS TIPVPPSNLH QHLAGMLHGV EIADVEFSVG GEPFRAHACV LAARSPVFRA ELLGPAAARS
201: IKIDDDDDME PATFKALLHF IYTDHLPNDS GFGKDAAMQR RLLVAADRYG VDRLRAMCGV KLYKSVSVGT VVDSLEFAEK HHCAQLKDAC LGFMASPNVL
301: GVVRKTDGFK RLVEGCPWVL KEILDKVPRF

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.