Factsheet for TraesCS4A01G465200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G465700.1	Wheat	cytosol	92.58	87.15
TraesCS5A01G528500.1	Wheat	cytosol	68.55	72.87
TraesCS5A01G528600.1	Wheat	cytosol	75.96	71.91
TraesCS4B01G360400.1	Wheat	cytosol	75.67	71.83
TraesCS5A01G554900.1	Wheat	cytosol	75.07	70.47
TraesCS3D01G513100.1	Wheat	cytosol, plastid	73.0	69.69
TraesCS5A01G361900.1	Wheat	cytosol	70.03	65.74
TraesCS2A01G472600.1	Wheat	cytosol	55.79	55.29
OQU82373	Sorghum	cytosol, plastid	51.63	51.33
OQU82372	Sorghum	plastid	51.93	51.32
TraesCS2A01G470900.1	Wheat	cytosol	53.12	49.72
TraesCS2A01G472700.1	Wheat	cytosol	52.82	48.9
TraesCS2A01G470400.1	Wheat	cytosol	51.34	47.92
TraesCS2A01G470000.1	Wheat	plastid	50.15	47.34
Os04t0625400-00	Rice	plastid	46.29	47.27
Os04t0625500-00	Rice	plastid	52.23	46.93
TraesCS2A01G470700.1	Wheat	cytosol, plastid	50.45	45.82
TraesCS5A01G462000.1	Wheat	cytosol	23.44	45.14
TraesCS2A01G471000.1	Wheat	cytosol	31.45	44.54
TraesCS2A01G473400.1	Wheat	cytosol	40.65	43.49
TraesCS5A01G452100.1	Wheat	cytosol	16.32	42.31
TraesCS2A01G473300.1	Wheat	cytosol	36.8	41.89
TraesCS2A01G471700.1	Wheat	cytosol	51.34	41.29
TraesCS2A01G473500.1	Wheat	cytosol	42.73	41.14
EES11459	Sorghum	plastid	46.29	40.94
TraesCS2A01G508000.1	Wheat	cytosol	16.91	40.71
TraesCS2A01G471800.1	Wheat	mitochondrion	54.3	40.49
TraesCS7A01G311400.1	Wheat	cytosol	21.07	39.01
TraesCS3A01G164400.1	Wheat	cytosol	28.19	38.46
TraesCS3A01G020200.1	Wheat	cytosol	40.06	37.71
TraesCS7A01G026200.1	Wheat	mitochondrion	36.2	37.54
TraesCS7A01G511200.1	Wheat	cytosol	17.21	37.42
TraesCS6A01G275800.1	Wheat	cytosol	41.25	37.37
TraesCS5A01G040900.1	Wheat	cytosol	24.93	37.33
TraesCS2A01G458500.1	Wheat	cytosol	14.54	36.84
TraesCS4A01G462500.1	Wheat	mitochondrion	38.87	36.8
TraesCS4A01G193000.1	Wheat	cytosol	39.47	36.74
TraesCS3A01G019700.1	Wheat	cytosol	39.47	36.74
TraesCS3A01G020800.1	Wheat	cytosol	38.58	36.52
TraesCS2A01G543300.1	Wheat	cytosol	35.91	36.12
TraesCS5A01G041300.1	Wheat	cytosol	37.69	36.08
TraesCS5A01G041400.1	Wheat	plastid	37.69	36.08
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	26.41	36.03
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	37.09	35.92
TraesCS2A01G458700.1	Wheat	cytosol	15.43	35.62
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	37.09	35.61
TraesCS5A01G040800.1	Wheat	cytosol	36.8	35.53
TraesCS5A01G451500.1	Wheat	cytosol	37.98	35.26
TraesCS5A01G451900.1	Wheat	cytosol	37.39	35.1
TraesCS5A01G461800.1	Wheat	cytosol	34.72	34.62
TraesCS7A01G511400.1	Wheat	cytosol	37.09	34.44
TraesCS5A01G451600.1	Wheat	cytosol	35.61	34.38
TraesCS2A01G418000.1	Wheat	cytosol	37.09	34.06
TraesCS3A01G212400.1	Wheat	cytosol	34.72	34.01
TraesCS2A01G418100.1	Wheat	cytosol	37.09	33.97
TraesCS7A01G550800.1	Wheat	cytosol	27.3	33.82
TraesCS3A01G320300.1	Wheat	cytosol	35.61	33.8
TraesCS2A01G366500.1	Wheat	cytosol	34.72	32.68
TraesCS7A01G511500.1	Wheat	cytosol	35.61	32.61
TraesCS2A01G255800.1	Wheat	cytosol	38.28	32.58
TraesCS6A01G167500.1	Wheat	plastid	32.05	32.34
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	40.65	32.24
TraesCS1A01G368600.1	Wheat	mitochondrion	33.23	32.18
TraesCS2A01G217100.1	Wheat	cytosol	33.83	31.67
TraesCS2A01G237800.1	Wheat	cytosol	39.76	31.46
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	37.39	31.19
TraesCS5A01G429400.2	Wheat	cytosol	39.76	30.66
TraesCS2A01G543600.1	Wheat	plastid	18.4	23.13

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS4A01G465200	EnsemblPlants:TraesCS4A01G465200.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr4A:-:728727940..728728955

Molecular Weight (calculated)

37504.2 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.018

Length

337 amino acids

Sequence
(BLAST)

001: MTISETSSRC LTECITIAHN FEVIKYSLLE GMGIGKSVTS STFSVGCYDW NILIYPDGSN EEDKAAYMSA LLCFCRGATA GVKVKFTLSL LEKDGTASVM
101: GGETRTFPPE GQTWGWAKFI DKSKLKELLS RNDDCFTIKC VLTVIKDTRT EDASTYVVPL PQSDLHTHFA NMLKDGEGMD VTFSVGGQLF SAHRCVLAAR
201: SSVFRELFGQ LKETSLKRIE IDDMETAIFE ALLHFIYTDS LPSNWDLYQN VELQHMLVAA DRYALDRLKA MCEGKLCQGI DVQTVATTLA LAEQHHAMQL
301: KAACLTYLSS QKVLRAVKET DGFKHLTASC PWIMMDI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.