Factsheet for TraesCS5A01G041000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G047800.1	Wheat	peroxisome	84.41	90.93
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	85.4	78.23
TraesCS5A01G040900.1	Wheat	cytosol	42.57	76.44
TraesCS5A01G041400.1	Wheat	plastid	64.11	73.58
TraesCS5A01G040800.1	Wheat	cytosol	62.38	72.21
TraesCS5A01G041300.1	Wheat	cytosol	60.89	69.89
TraesCS2A01G508000.1	Wheat	cytosol	23.51	67.86
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	58.91	67.81
TraesCS4A01G462500.1	Wheat	mitochondrion	46.78	53.09
TraesCS7A01G026200.1	Wheat	mitochondrion	41.09	51.08
TraesCS5A01G452100.1	Wheat	cytosol	16.34	50.77
TraesCS2A01G543300.1	Wheat	cytosol	41.83	50.45
TraesCS3A01G019700.1	Wheat	cytosol	45.05	50.28
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	42.82	49.71
TraesCS2A01G366500.1	Wheat	cytosol	43.81	49.44
TraesCS5A01G462000.1	Wheat	cytosol	21.29	49.14
TraesCS7A01G511200.1	Wheat	cytosol	18.81	49.03
TraesCS3A01G020200.1	Wheat	cytosol	43.07	48.6
TraesCS3A01G320300.1	Wheat	cytosol	42.57	48.45
TraesCS3A01G020800.1	Wheat	cytosol	42.57	48.31
TraesCS2A01G458500.1	Wheat	cytosol	15.84	48.12
TraesCS2A01G458700.1	Wheat	cytosol	17.33	47.95
TraesCS7A01G511400.1	Wheat	cytosol	42.08	46.83
TraesCS3A01G164400.1	Wheat	cytosol	28.22	46.15
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	27.97	45.75
TraesCS6A01G275800.1	Wheat	cytosol	41.83	45.43
TraesCS7A01G511500.1	Wheat	cytosol	40.35	44.29
TraesCS7A01G311400.1	Wheat	cytosol	19.8	43.96
TraesCS2A01G418000.1	Wheat	cytosol	38.37	42.23
TraesCS4A01G193000.1	Wheat	cytosol	37.62	41.99
TraesCS2A01G418100.1	Wheat	cytosol	37.13	40.76
TraesCS1A01G368600.1	Wheat	mitochondrion	34.9	40.52
TraesCS5A01G451500.1	Wheat	cytosol	36.39	40.5
TraesCS3A01G212400.1	Wheat	cytosol	34.16	40.12
TraesCS5A01G451900.1	Wheat	cytosol	35.4	39.83
TraesCS5A01G451600.1	Wheat	cytosol	34.41	39.83
TraesCS6A01G167500.1	Wheat	plastid	32.67	39.52
TraesCS2A01G472600.1	Wheat	cytosol	33.17	39.41
TraesCS2A01G217100.1	Wheat	cytosol	34.65	38.89
TraesCS5A01G528500.1	Wheat	cytosol	30.45	38.8
TraesCS5A01G461800.1	Wheat	cytosol	32.43	38.76
TraesCS2A01G470900.1	Wheat	cytosol	33.66	37.78
TraesCS4A01G465700.1	Wheat	cytosol	33.42	37.71
TraesCS7A01G550800.1	Wheat	cytosol	25.25	37.5
TraesCS4A01G465200.1	Wheat	cytosol	31.19	37.39
TraesCS5A01G528600.1	Wheat	cytosol	32.92	37.36
TraesCS2A01G472700.1	Wheat	cytosol	33.42	37.09
TraesCS2A01G470400.1	Wheat	cytosol	32.67	36.57
TraesCS2A01G471000.1	Wheat	cytosol	21.53	36.55
TraesCS2A01G470000.1	Wheat	plastid	32.18	36.41
TraesCS2A01G470700.1	Wheat	cytosol, plastid	33.42	36.39
TraesCS2A01G473400.1	Wheat	cytosol	28.22	36.19
TraesCS2A01G473300.1	Wheat	cytosol	26.24	35.81
TraesCS5A01G554900.1	Wheat	cytosol	31.44	35.38
TraesCS2A01G543600.1	Wheat	plastid	23.27	35.07
TraesCS2A01G473500.1	Wheat	cytosol	29.7	34.29
TraesCS5A01G361900.1	Wheat	cytosol	28.71	32.31
TraesCS2A01G255800.1	Wheat	cytosol	31.19	31.82
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	32.18	30.59
TraesCS5A01G429400.2	Wheat	cytosol	31.44	29.06
TraesCS2A01G237800.1	Wheat	cytosol	30.2	28.64
TraesCS2A01G471800.1	Wheat	mitochondrion	29.46	26.33
TraesCS2A01G471700.1	Wheat	cytosol	25.99	25.06

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5A01G041000	EnsemblPlants:TraesCS5A01G041000.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr5A:-:36949131..36950552

Molecular Weight (calculated)

45094.4 Da

IEP (calculated)

5.827

GRAVY (calculated)

-0.106

Length

404 amino acids

Sequence
(BLAST)

001: MEGSQSSIVR VPARCTAETQ TSRATVAFEI AGYSLHKGLG RGKYLRSPAF SVGGYEWCIR YYPDGSPDEA SEGCVSVFLK LLTKNAEVRA TYNLMLVEPV
101: KGQSTVVPSS EEPQVFDRER PSWGLRRFMK TTAEVEWANL WNDCLVIECE VTVIKETFDV HVPPSDLSDN LATLLEGKKG ADVTFKVQGE VFSAHKILLA
201: MRSPVFEAEF YGPLGNKGAQ NGHDWLADKN WQANIWHFQQ VTAIKLAKIL LVLRGWLGAN QLLDKILVCL PIGNPNFGSK PSSLDITIDD MQPAVFRAFL
301: HFIYTDSMPS MRDLEDDDKI EMVKHLLVAA DKYGMERMKR ICEGMLCKSL DVETVAAILA LADQHHCSNL KDACIEFMLS SNRMNDVMAS QGMHTSKDIL
401: LMSL

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.