Factsheet for TraesCS2A01G418000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G418100.1	Wheat	cytosol	91.01	90.76
TraesCS2D01G415300.1	Wheat	cytosol	91.28	90.54
TraesCS2A01G458700.1	Wheat	cytosol	29.43	73.97
TraesCS2A01G458500.1	Wheat	cytosol	24.8	68.42
TraesCS3A01G164400.1	Wheat	cytosol	45.78	68.02
TraesCS5A01G462000.1	Wheat	cytosol	26.7	56.0
TraesCS5A01G452100.1	Wheat	cytosol	19.62	55.38
TraesCS2A01G508000.1	Wheat	cytosol	20.71	54.29
TraesCS5A01G040900.1	Wheat	cytosol	32.43	52.89
TraesCS7A01G511200.1	Wheat	cytosol	21.8	51.61
OQU80115	Sorghum	cytosol	45.5	47.71
TraesCS5A01G451500.1	Wheat	cytosol	46.32	46.83
TraesCS7A01G311400.1	Wheat	cytosol	23.16	46.7
TraesCS2A01G217100.1	Wheat	cytosol	45.23	46.11
TraesCS7A01G026200.1	Wheat	mitochondrion	40.6	45.85
TraesCS4A01G462500.1	Wheat	mitochondrion	44.14	45.51
TraesCS5A01G451900.1	Wheat	cytosol	44.41	45.4
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	43.05	45.4
TraesCS3A01G212400.1	Wheat	cytosol	42.23	45.06
TraesCS2A01G543300.1	Wheat	cytosol	40.87	44.78
TraesCS4A01G193000.1	Wheat	cytosol	44.14	44.75
TraesCS5A01G451600.1	Wheat	cytosol	42.23	44.41
TraesCS5A01G461800.1	Wheat	cytosol	40.87	44.38
TraesCS3A01G019700.1	Wheat	cytosol	43.32	43.92
TraesCS6A01G275800.1	Wheat	cytosol	44.41	43.82
TraesCS5A01G041400.1	Wheat	plastid	41.96	43.75
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	41.69	43.59
TraesCS3A01G320300.1	Wheat	cytosol	41.96	43.38
TraesCS5A01G041300.1	Wheat	cytosol	41.42	43.18
TraesCS3A01G020800.1	Wheat	cytosol	41.42	42.7
TraesCS2A01G366500.1	Wheat	cytosol	41.42	42.46
TraesCS5A01G040800.1	Wheat	cytosol	40.33	42.41
TraesCS3A01G020200.1	Wheat	cytosol	41.14	42.18
TraesCS7A01G511400.1	Wheat	cytosol	41.69	42.15
TraesCS1A01G368600.1	Wheat	mitochondrion	39.51	41.67
TraesCS6A01G167500.1	Wheat	plastid	37.6	41.32
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	27.79	41.3
TraesCS5A01G528500.1	Wheat	cytosol	35.15	40.69
TraesCS7A01G511500.1	Wheat	cytosol	40.33	40.22
TraesCS7A01G550800.1	Wheat	cytosol	29.43	39.71
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	42.23	38.37
TraesCS4A01G465700.1	Wheat	cytosol	36.51	37.43
TraesCS2A01G471000.1	Wheat	cytosol	24.25	37.4
TraesCS5A01G528600.1	Wheat	cytosol	36.24	37.36
TraesCS4A01G465200.1	Wheat	cytosol	34.06	37.09
TraesCS2A01G472600.1	Wheat	cytosol	34.33	37.06
TraesCS2A01G470900.1	Wheat	cytosol	35.97	36.67
TraesCS2A01G472700.1	Wheat	cytosol	36.24	36.54
TraesCS5A01G554900.1	Wheat	cytosol	35.69	36.49
TraesCS5A01G361900.1	Wheat	cytosol	34.06	34.82
TraesCS2A01G470000.1	Wheat	plastid	33.24	34.17
TraesCS2A01G470400.1	Wheat	cytosol	33.52	34.07
TraesCS2A01G470700.1	Wheat	cytosol, plastid	34.33	33.96
TraesCS2A01G473300.1	Wheat	cytosol	26.43	32.77
TraesCS2A01G473400.1	Wheat	cytosol	27.52	32.06
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	37.06	32.0
TraesCS2A01G255800.1	Wheat	cytosol	33.79	31.31
TraesCS2A01G473500.1	Wheat	cytosol	29.43	30.86
TraesCS2A01G237800.1	Wheat	cytosol	35.42	30.52
TraesCS5A01G429400.2	Wheat	cytosol	36.24	30.43
TraesCS2A01G543600.1	Wheat	plastid	20.44	27.99
TraesCS2A01G471800.1	Wheat	mitochondrion	33.52	27.21
TraesCS2A01G471700.1	Wheat	cytosol	29.7	26.01

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2A01G418000	EnsemblPlants:TraesCS2A01G418000.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr2A:-:673548621..673549724

Molecular Weight (calculated)

40911.9 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.105

Length

367 amino acids

Sequence
(BLAST)

001: MGSTNTPATR HAADTVGVQQ GSHVFEISGY SLHRSLLHGG CATSDAFSVG GYNWQIRVYP WGVFDLDYYR DYVGVFLDLC SDHRVTASFR FSLVDVTGSS
101: PPHTMTKTRE FGSGGRSCSG DWVFKKRSEL EASPYLRNDR FTIECVVTIV EDEKSFVEEA PPSDITDHLG KLLQGKEGTD VIFEVQGEAF PAHKLVLAMR
201: SPVFKAELYG AMREKDMSRI AINDMQPVVF EALLHFIYTD SLPAMDDLGR DDYRDIVSHL LVAADRYAME RLKIICENIL CKNIDAKTVV TTLALADWHH
301: CGRLNDACIR FIATLDTRGM DDMMASQGYV TLKTTCPLAL VELLEKTSRL AKSKSSIHIG SLLVHAY

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.