Factsheet for TraesCS5A01G041300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G041400.1	Wheat	plastid	81.82	81.82
TraesCS2A01G508000.1	Wheat	cytosol	32.1	80.71
TraesCS5A01G040900.1	Wheat	cytosol	51.14	80.0
TraesCS5A01G040800.1	Wheat	cytosol	75.0	75.64
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	68.75	68.95
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	69.89	60.89
TraesCS5A01G452100.1	Wheat	cytosol	21.31	57.69
TraesCS4A01G462500.1	Wheat	mitochondrion	58.24	57.58
TraesCS7A01G026200.1	Wheat	mitochondrion	51.42	55.69
TraesCS7A01G511200.1	Wheat	cytosol	24.43	55.48
TraesCS3A01G019700.1	Wheat	cytosol	55.97	54.42
TraesCS2A01G458500.1	Wheat	cytosol	19.89	52.63
TraesCS3A01G020200.1	Wheat	cytosol	52.84	51.96
TraesCS3A01G020800.1	Wheat	cytosol	52.27	51.69
TraesCS2A01G366500.1	Wheat	cytosol	51.99	51.12
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	50.28	50.86
TraesCS5A01G462000.1	Wheat	cytosol	25.28	50.86
TraesCS2A01G458700.1	Wheat	cytosol	21.02	50.68
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	34.66	49.39
TraesCS3A01G320300.1	Wheat	cytosol	48.3	47.89
TraesCS7A01G511400.1	Wheat	cytosol	49.15	47.66
TraesCS2A01G543300.1	Wheat	cytosol	45.17	47.46
TraesCS3A01G164400.1	Wheat	cytosol	33.24	47.37
TraesCS7A01G311400.1	Wheat	cytosol	24.15	46.7
TraesCS7A01G511500.1	Wheat	cytosol	48.3	46.2
TraesCS6A01G275800.1	Wheat	cytosol	47.73	45.16
TraesCS1A01G368600.1	Wheat	mitochondrion	42.9	43.39
TraesCS4A01G193000.1	Wheat	cytosol	43.75	42.54
TraesCS2A01G217100.1	Wheat	cytosol	42.9	41.94
TraesCS3A01G212400.1	Wheat	cytosol	40.91	41.86
TraesCS5A01G451900.1	Wheat	cytosol	42.33	41.5
TraesCS2A01G418000.1	Wheat	cytosol	43.18	41.42
TraesCS5A01G451600.1	Wheat	cytosol	40.06	40.4
TraesCS5A01G451500.1	Wheat	cytosol	41.48	40.22
TraesCS2A01G418100.1	Wheat	cytosol	41.76	39.95
TraesCS5A01G461800.1	Wheat	cytosol	37.78	39.35
TraesCS7A01G550800.1	Wheat	cytosol	30.11	38.97
TraesCS5A01G528500.1	Wheat	cytosol	34.94	38.8
TraesCS2A01G472600.1	Wheat	cytosol	37.22	38.53
TraesCS4A01G465700.1	Wheat	cytosol	38.35	37.71
TraesCS4A01G465200.1	Wheat	cytosol	36.08	37.69
TraesCS5A01G528600.1	Wheat	cytosol	37.78	37.36
TraesCS6A01G167500.1	Wheat	plastid	34.66	36.53
TraesCS2A01G470700.1	Wheat	cytosol, plastid	37.78	35.85
TraesCS2A01G470000.1	Wheat	plastid	35.8	35.29
TraesCS2A01G471000.1	Wheat	cytosol	23.58	34.87
TraesCS5A01G554900.1	Wheat	cytosol	35.51	34.82
TraesCS2A01G470900.1	Wheat	cytosol	35.51	34.72
TraesCS2A01G472700.1	Wheat	cytosol	35.8	34.62
TraesCS2A01G470400.1	Wheat	cytosol	34.38	33.52
TraesCS2A01G473400.1	Wheat	cytosol	29.26	32.7
TraesCS2A01G543600.1	Wheat	plastid	24.72	32.46
TraesCS5A01G361900.1	Wheat	cytosol	32.95	32.31
TraesCS2A01G473500.1	Wheat	cytosol	32.1	32.29
TraesCS2A01G255800.1	Wheat	cytosol	35.8	31.82
TraesCS2A01G473300.1	Wheat	cytosol	26.42	31.42
TraesCS5A01G429400.2	Wheat	cytosol	36.93	29.75
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	35.8	29.65
TraesCS2A01G237800.1	Wheat	cytosol	35.51	29.34
TraesCS2A01G471800.1	Wheat	mitochondrion	33.24	25.89
TraesCS2A01G471700.1	Wheat	cytosol	30.11	25.3

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5A01G041300	EnsemblPlants:TraesCS5A01G041300.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:37193304..37194362

Molecular Weight (calculated)

39535.9 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.011

Length

352 amino acids

Sequence
(BLAST)

001: MAVSQTSIAM VPSRCTSETH MARATVAVEI SGYSRVKGLG RGECLHSPVF SIGSYEWCIC YYPDGYDEAN EGYVSVFLEL LTKNAEARVL HKWMLVNRFS
101: GRSIVVHSSK APRAFDHEFP AWGVGKFMKK TAEVESVYVR KDCLVIECEL SVIKETLDIH VPPSDLLDNF ATLLEGKIGA DVTFKVQGDV FSAHKILLVM
201: RSAVFNAEFY GPMGNKGVQD IIINNMQPAV FKAFLHFIYT DSMPSIDDLD DDDKREMVKH LLVAAYKYAM ERMKRICEGM LCKSLDVETV ATILALADQH
301: HCNNLKDACI EFMLSSNRMD DVIASQGYAH LKRSCPDLIV DVFERTVKSR KI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.