Factsheet for TraesCS5A01G040800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042100.1	Wheat	cytosol	34.38	94.49
TraesCS5D01G047900.1	Wheat	cytosol	36.68	91.43
TraesCS5A01G040900.1	Wheat	cytosol	55.3	85.78
TraesCS5A01G041400.1	Wheat	plastid	79.37	78.69
TraesCS2A01G508000.1	Wheat	cytosol	31.52	78.57
HORVU0Hr1G010120.1	Barley	plastid	75.93	75.07
TraesCS5A01G041300.1	Wheat	cytosol	75.64	75.0
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	68.19	67.81
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	72.21	62.38
TraesCS5A01G452100.1	Wheat	cytosol	20.63	55.38
TraesCS4A01G462500.1	Wheat	mitochondrion	56.45	55.34
TraesCS7A01G026200.1	Wheat	mitochondrion	51.29	55.08
TraesCS7A01G511200.1	Wheat	cytosol	24.07	54.19
TraesCS3A01G019700.1	Wheat	cytosol	55.59	53.59
TraesCS2A01G366500.1	Wheat	cytosol	54.44	53.07
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	52.15	52.3
TraesCS3A01G020800.1	Wheat	cytosol	53.01	51.97
TraesCS3A01G020200.1	Wheat	cytosol	53.01	51.68
TraesCS3A01G320300.1	Wheat	cytosol	51.29	50.42
TraesCS5A01G462000.1	Wheat	cytosol	25.21	50.29
TraesCS7A01G511400.1	Wheat	cytosol	51.86	49.86
TraesCS2A01G458700.1	Wheat	cytosol	20.63	49.32
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	34.38	48.58
TraesCS7A01G311400.1	Wheat	cytosol	25.21	48.35
TraesCS2A01G458500.1	Wheat	cytosol	18.34	48.12
TraesCS2A01G543300.1	Wheat	cytosol	45.85	47.76
TraesCS6A01G275800.1	Wheat	cytosol	50.43	47.31
TraesCS7A01G511500.1	Wheat	cytosol	47.56	45.11
TraesCS1A01G368600.1	Wheat	mitochondrion	44.41	44.54
TraesCS3A01G164400.1	Wheat	cytosol	31.52	44.53
TraesCS4A01G193000.1	Wheat	cytosol	45.27	43.65
TraesCS5A01G451500.1	Wheat	cytosol	42.98	41.32
TraesCS5A01G451900.1	Wheat	cytosol	42.41	41.23
TraesCS2A01G217100.1	Wheat	cytosol	42.41	41.11
TraesCS3A01G212400.1	Wheat	cytosol	40.4	40.99
TraesCS5A01G451600.1	Wheat	cytosol	40.4	40.4
TraesCS2A01G418000.1	Wheat	cytosol	42.41	40.33
TraesCS2A01G418100.1	Wheat	cytosol	42.12	39.95
TraesCS5A01G461800.1	Wheat	cytosol	38.11	39.35
TraesCS7A01G550800.1	Wheat	cytosol	29.23	37.5
TraesCS4A01G465700.1	Wheat	cytosol	37.82	36.87
TraesCS4A01G465200.1	Wheat	cytosol	35.53	36.8
TraesCS5A01G528600.1	Wheat	cytosol	37.25	36.52
TraesCS2A01G472600.1	Wheat	cytosol	35.53	36.47
TraesCS6A01G167500.1	Wheat	plastid	34.67	36.23
TraesCS5A01G528500.1	Wheat	cytosol	32.66	35.96
TraesCS2A01G543600.1	Wheat	plastid	27.22	35.45
TraesCS2A01G470900.1	Wheat	cytosol	36.39	35.28
TraesCS2A01G472700.1	Wheat	cytosol	36.39	34.89
TraesCS2A01G473400.1	Wheat	cytosol	31.23	34.6
TraesCS2A01G470700.1	Wheat	cytosol, plastid	36.39	34.23
TraesCS2A01G470000.1	Wheat	plastid	34.67	33.89
TraesCS2A01G471000.1	Wheat	cytosol	22.92	33.61
TraesCS2A01G470400.1	Wheat	cytosol	34.67	33.52
TraesCS2A01G473300.1	Wheat	cytosol	28.37	33.45
TraesCS2A01G473500.1	Wheat	cytosol	33.52	33.43
TraesCS5A01G554900.1	Wheat	cytosol	34.38	33.43
TraesCS5A01G361900.1	Wheat	cytosol	32.95	32.03
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	38.68	31.76
TraesCS2A01G255800.1	Wheat	cytosol	35.24	31.06
TraesCS5A01G429400.2	Wheat	cytosol	37.82	30.21
TraesCS2A01G237800.1	Wheat	cytosol	36.68	30.05
TraesCS2A01G471800.1	Wheat	mitochondrion	32.66	25.22
TraesCS2A01G471700.1	Wheat	cytosol	29.23	24.34

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS5A01G040800
EnsemblPlants:TraesCS5A01G040800.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr5A:-:36825530..36826832

Molecular Weight (calculated)

38918.3 Da

IEP (calculated)

7.209

GRAVY (calculated)

-0.066

Length

349 amino acids

Sequence
(BLAST)

001: MTASQSSIAS VPSRCTAETA RGTVAFKIAG YSLHKGLGIG KWLRSPSFSI GGYEWCIYYY PDGYQEENST GHVSILLRLL TKNAKVRVLH KLMLVEPVSG
101: RSIVVNSCKT PKVFDDKMSW AVPKFMKTTA EVESVYLQND CLLIECELSV IKETEIHVPP SDLSDNLATL LEGKIGAEVT FKVQGEVFSA HKILLAMRSA
201: VFNAQFYGPM RDKGAHDITI DDMQSAVFKS FLHFIYTDSM PSMDDLEDDD KREMVKHLLV AADKYAMGRM KMICEGMICK SLDVENVATL LALADKHNCR
301: NLKDACIEFM LSSNRMNDVI ASQGYVQLKR SSPDIIVDVL ERAAKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.