Factsheet for HORVU0Hr1G010120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 2
plasma membrane 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G042100.1	Wheat	cytosol	32.29	89.76
TraesCS5D01G047900.1	Wheat	cytosol	33.71	85.0
TraesCS5A01G040900.1	Wheat	cytosol	53.26	83.56
TraesCS5D01G048000.1	Wheat	cytosol	77.05	79.3
TraesCS5B01G042300.1	Wheat	plastid	77.9	78.35
HORVU5Hr1G009850.1	Barley	cytosol	77.05	77.71
TraesCS5A01G040800.1	Wheat	cytosol	75.07	75.93
HORVU2Hr1G112920.1	Barley	cytosol	75.35	75.78
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	75.07	60.09
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	52.97	53.58
HORVU7Hr1G114550.1	Barley	cytosol, plastid	49.29	46.77
HORVU5Hr1G110530.1	Barley	cytosol	30.31	43.15
HORVU5Hr1G108760.1	Barley	cytosol	41.36	42.82
HORVU7Hr1G074420.1	Barley	cytosol	32.58	39.52
HORVU3Hr1G084920.2	Barley	cytosol	29.46	39.25
HORVU7Hr1G074430.1	Barley	cytosol	39.66	39.22
HORVU6Hr1G034020.1	Barley	plastid	28.05	38.67
HORVU5Hr1G108800.1	Barley	cytosol	36.83	38.12
HORVU5Hr1G089030.1	Barley	cytosol	37.39	37.18
HORVU2Hr1G106560.1	Barley	plastid	36.83	36.41
HORVU6Hr1G069480.1	Barley	plastid	48.73	36.21
HORVU2Hr1G023850.1	Barley	cytosol, plastid	39.38	35.46
HORVU5Hr1G104190.1	Barley	cytosol	39.09	34.16
HORVU2Hr1G064920.1	Barley	plastid	36.83	30.23
HORVU2Hr1G055140.1	Barley	cytosol	39.09	30.07
HORVU2Hr1G106750.2	Barley	plastid	38.24	28.48

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU0Hr1G010120	EnsemblPlants:HORVU0Hr1G010120.1	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	UniProt:M0Y3G6	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0002951F60	:	:

Description

No Description!

Coordinates

chrchrUn:+:57443000..57444489

Molecular Weight (calculated)

39356.4 Da

IEP (calculated)

5.580

GRAVY (calculated)

-0.065

Length

353 amino acids

Sequence
(BLAST)

001: MAASHSSMAR VPSRCKAETA RATVTFEVAG YSLLKGLGRG KFLNSPAFTV GGYEWCIRYY PDGHESLGEA GEGYVSVFLQ LLTENAEATA FFNFWLVLPV
101: GGKSIVVHSG QPPEVFDHRW PAWGVPKFMK RTAEIESLYL RNDCLVIECE VSVIKETFEV HVPPSDLSDN LAKLLEGEKG ADVTFKVQGE VFSAHKILLA
201: MRSTVFDAKF YGPMGDKEAH DISIDDMQPA VFKAFLHFIY TDSMPSMDNL DDDDRREMVK HLLVAADKYA MERMKMICEG MLCKSLDVET VATVLSLADQ
301: HHCTNLKDAC IEFMLSSNRM NDVIASQGYL HLKRSSPDLI VDVLERAAKS CKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.