Factsheet for HORVU2Hr1G106560.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G469800.1	Wheat	plastid	89.92	89.92
TraesCS2A01G470000.1	Wheat	plastid	88.24	88.24
TraesCS2B01G492800.1	Wheat	plastid	66.39	65.65
HORVU3Hr1G084920.2	Barley	cytosol	39.5	53.21
HORVU5Hr1G089030.1	Barley	cytosol	47.9	48.17
HORVU2Hr1G106750.2	Barley	plastid	54.34	40.93
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	36.97	37.82
HORVU0Hr1G010120.1	Barley	plastid	36.41	36.83
HORVU5Hr1G009850.1	Barley	cytosol	35.85	36.57
HORVU5Hr1G108760.1	Barley	cytosol	34.73	36.36
HORVU2Hr1G112920.1	Barley	cytosol	34.73	35.33
HORVU5Hr1G110530.1	Barley	cytosol	24.37	35.08
HORVU2Hr1G023850.1	Barley	cytosol, plastid	38.1	34.69
HORVU7Hr1G074430.1	Barley	cytosol	34.45	34.45
HORVU7Hr1G074420.1	Barley	cytosol	27.17	33.33
HORVU7Hr1G114550.1	Barley	cytosol, plastid	34.45	33.06
HORVU5Hr1G108800.1	Barley	cytosol	30.81	32.26
HORVU5Hr1G104190.1	Barley	cytosol	36.41	32.18
HORVU2Hr1G064920.1	Barley	plastid	38.1	31.63
HORVU6Hr1G034020.1	Barley	plastid	22.13	30.86
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	37.82	30.61
HORVU6Hr1G069480.1	Barley	plastid	38.66	29.05
HORVU2Hr1G055140.1	Barley	cytosol	35.29	27.45

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287JBU9	InterPro:BPM_C
InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU2Hr1G106560
EnsemblPlants:HORVU2Hr1G106560.1	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B462183	:	:

Description

No Description!

Coordinates

chrchr2H:-:709732633..709733923

Molecular Weight (calculated)

39582.3 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.157

Length

357 amino acids

Sequence
(BLAST)

001: MATNSTAAAS HGQCLPKSSS RCLTPSVTAT HDFEVTSYPL LQGIGVEKLV SSTVFSVGGF NWTISFFPDG VRHGSFGNAS AFLNCLSPEK DVRARFTLNL
101: LDKSGAQVSK FEEMEYTFTP KCVYRGYAQF AGRSWLKSWS DSNGSFVIRC VLTVIGEPRT EVKRDRALVT RPNLQDQLEE MRKKGEGADV TFRVCGQLFH
201: AHRCLLAARS PVFKAELFGP MKEKATQSIK VEDIEPQIFE GLLHFVYTDS VPDDEHSRDG STAKLQHLLV AADRYGLDGL MVLCESKLCE SIDVETVATT
301: LVLAEQHHCR DLQEACVEFM APQNVLQAVM ATDGFKHLLA SRPLLMKEIL DKVSRTD

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.