Factsheet for HORVU6Hr1G034020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G156500.1	Wheat	plastid	91.02	69.76
TraesCS6A01G167500.1	Wheat	plastid	91.02	69.76
OQU80118	Sorghum	cytosol	19.14	40.16
HORVU5Hr1G110530.1	Barley	cytosol	38.28	39.52
HORVU3Hr1G084920.2	Barley	cytosol	34.77	33.58
HORVU5Hr1G108760.1	Barley	cytosol	43.75	32.84
HORVU5Hr1G108800.1	Barley	cytosol	41.41	31.09
HORVU7Hr1G074420.1	Barley	cytosol	33.2	29.21
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	39.06	28.65
HORVU2Hr1G112920.1	Barley	cytosol	39.06	28.49
Zm00001d024349_P001	Maize	cytosol	39.45	28.13
HORVU0Hr1G010120.1	Barley	plastid	38.67	28.05
HORVU5Hr1G009850.1	Barley	cytosol	37.5	27.43
HORVU7Hr1G074430.1	Barley	cytosol	35.94	25.77
HORVU7Hr1G114550.1	Barley	cytosol, plastid	37.11	25.54
HORVU5Hr1G089030.1	Barley	cytosol	33.98	24.51
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	39.06	22.68
HORVU2Hr1G106560.1	Barley	plastid	30.86	22.13
HORVU2Hr1G023850.1	Barley	cytosol, plastid	33.59	21.94
HORVU2Hr1G064920.1	Barley	plastid	34.38	20.47
HORVU5Hr1G104190.1	Barley	cytosol	31.64	20.05
HORVU2Hr1G106750.2	Barley	plastid	36.72	19.83
HORVU6Hr1G069480.1	Barley	plastid	36.33	19.58
HORVU2Hr1G055140.1	Barley	cytosol	30.08	16.78

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287TVY3	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G034020	EnsemblPlants:HORVU6Hr1G034020.1	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379
PANTHER:PTHR26379:SF212	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI000B4712CF	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:157149418..157150302

Molecular Weight (calculated)

27753.7 Da

IEP (calculated)

8.370

GRAVY (calculated)

0.045

Length

256 amino acids

Sequence
(BLAST)

001: LELLSAGARV RASCDLTIVG QRPGAPSLVS RTPPMLFSSD LSRFAPSTSK FVKRRKLEAA SLGLVHGDRL VIECVVTVFM YPTVVTRTAA PNEDPPSDLH
101: RDLARMYESQ AGADIGFLVG GQGFRAHGTV LAMRSPAFMA EVVRGGGLGF SGGCVDINDM KPEAFDALLY YIYMDSLPAA MSNVDGDRKR ELVMDLLAAA
201: DRYGIQRLKL ICETALSKTL EANTVVTTLT SAEKHHCQRL RQACLQFIAS SVNQIK

Best Arabidopsis Sequence Match ( AT3G06190.5 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKGTED HSLLV

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.