CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024349_P001	Maize	cytosol	76.23	25.91
KXG24752	Sorghum	cytosol	32.79	24.24
HORVU6Hr1G034020.1	Barley	plastid	40.16	19.14
KXG24742	Sorghum	mitochondrion	51.64	17.45
OQU80115	Sorghum	cytosol	48.36	16.86
EES13596	Sorghum	mitochondrion	45.9	16.14
EES14743	Sorghum	cytosol, mitochondrion, plastid	47.54	16.11
EER87831	Sorghum	cytosol	46.72	16.1
EES14728	Sorghum	cytosol	46.72	16.1
EES14737	Sorghum	cytosol	45.9	15.77
EER99574	Sorghum	cytosol	45.9	15.34
EES14736	Sorghum	cytosol	44.26	15.21
OQU80150	Sorghum	plastid	41.8	14.61
TraesCS6A01G167500.1	Wheat	plastid	39.34	14.37
TraesCS6D01G156500.1	Wheat	plastid	39.34	14.37
EES08963	Sorghum	cytosol	43.44	13.95
KXG24755	Sorghum	mitochondrion	42.62	13.83
KXG24756	Sorghum	cytosol	40.16	13.8
OQU80119	Sorghum	cytosol	42.62	13.72
EES11455	Sorghum	cytosol	35.25	13.27
EES13585	Sorghum	cytosol, plastid	41.8	13.21
KXG24747	Sorghum	cytosol	38.52	13.13
EES11459	Sorghum	plastid	39.34	12.6
KXG27151	Sorghum	plastid	39.34	12.44
OQU82373	Sorghum	cytosol, plastid	33.61	12.09
OQU82372	Sorghum	plastid	32.79	11.73
KXG24406	Sorghum	cytosol	39.34	11.43
EER97813	Sorghum	plastid	35.25	10.7
EER99824	Sorghum	plastid	35.25	10.09
EER90755	Sorghum	cytosol	34.43	9.79
KXG34465	Sorghum	cytosol	33.61	9.3
KXG24338	Sorghum	cytosol	35.25	9.07
TraesCS5D01G474700.1	Wheat	cytosol	0.82	0.43
KXG25976	Sorghum	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:OQU80118	EnsemblPlantsGene:SORBI_3007G081701	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
PFAM:PF00651	ProteinID:OQU80118	ProteinID:OQU80118.1	SUPFAM:SSF54695	UniParc:UPI000B8B9B09	UniProt:A0A1Z5R8P5
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9715051..9715745

Molecular Weight (calculated)

13738.7 Da

IEP (calculated)

5.536

GRAVY (calculated)

-0.165

Length

122 amino acids

Sequence
(BLAST)

001: MRPETFRALL HFIYTDSLPA MSHLGMDEMR ELVQDLLAAA DRYAVDRLKV MCEHILARTL HVENAARTLV LADRHGCDRL KHASIQFMES SSDKSEMGLM
101: ASSSNKVEMG DDVAIEALEK TM

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.