CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G471000.1	Wheat	cytosol	32.41	44.12
TraesCS4D01G197600.1	Wheat	cytosol	44.44	41.03
OQU82372	Sorghum	plastid	37.35	35.48
OQU80115	Sorghum	cytosol	38.27	35.43
OQU82373	Sorghum	cytosol, plastid	37.04	35.4
OQU80118	Sorghum	cytosol	13.27	35.25
KXG27151	Sorghum	plastid	41.98	35.23
EES11459	Sorghum	plastid	40.74	34.65
EES14743	Sorghum	cytosol, mitochondrion, plastid	35.8	32.22
OQU80150	Sorghum	plastid	34.26	31.81
KXG24742	Sorghum	mitochondrion	34.88	31.3
EES14728	Sorghum	cytosol	33.95	31.07
EER87831	Sorghum	cytosol	33.95	31.07
EES14736	Sorghum	cytosol	33.95	30.99
KXG24752	Sorghum	cytosol	15.74	30.91
EES13596	Sorghum	mitochondrion	33.02	30.84
EES08963	Sorghum	cytosol	35.49	30.26
KXG24755	Sorghum	mitochondrion	34.57	29.79
KXG24747	Sorghum	cytosol	32.1	29.05
EER99574	Sorghum	cytosol	32.41	28.77
KXG24756	Sorghum	cytosol	31.48	28.73
EES14737	Sorghum	cytosol	31.17	28.45
TraesCS2B01G493700.2	Wheat	cytosol	44.75	28.16
OQU80119	Sorghum	cytosol	32.1	27.44
EES13585	Sorghum	cytosol, plastid	32.41	27.2
EER97813	Sorghum	plastid	33.02	26.62
KXG25976	Sorghum	cytosol	9.88	26.45
EER99824	Sorghum	plastid	33.64	25.59
KXG24338	Sorghum	cytosol	33.33	22.78
EER90755	Sorghum	cytosol	29.32	22.14
KXG24406	Sorghum	cytosol	28.7	22.14
KXG34465	Sorghum	cytosol	29.94	22.0

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8074732	InterPro:BTB/POZ_dom	UniProt:C5YG77
EnsemblPlants:EES11455	ProteinID:EES11455	ProteinID:EES11455.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3006G221700
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A86FDC	RefSeq:XP_002447127.1	:

Description

hypothetical protein

Coordinates

chr6:+:56833185..56834159

Molecular Weight (calculated)

35826.3 Da

IEP (calculated)

7.139

GRAVY (calculated)

-0.121

Length

324 amino acids

Sequence
(BLAST)

001: MARVPADARG EPSKTSSWRV TERATATHDF VVIEYSKLKM LGVGQHVSSD AFRAGGHDWK VMFYPKLAQA EGRIADYCPP FFPGGASLHL CDADKDTELM
101: VRFTLSVLHQ DGRVSPMASR TRTEIFGAPP RQRHGFNRLV HGSMLTWRCI HNDALTIRCT LTVVGTRDPV PPPELAAHLA RLLGNGMGAD VTFQVGARSF
201: PAHRIMLAAR SPIFSAEFFG DMTEKDTPCI KIVDMRPEIF ELLLRFIYTE ALPGDGEGCD AATMQHLLVA ADRYGLDRLK QICELKLHAS VDAETVDSML
301: ALAERHSCPR LRDACVACMS SLEQ

Best Arabidopsis Sequence Match ( AT2G39760.3 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGD SMLD

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.