CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0226400-00	Rice	cytosol	54.24	52.6
KXG24742	Sorghum	mitochondrion	53.11	52.08
OQU80115	Sorghum	cytosol	48.87	49.43
EES14736	Sorghum	cytosol	48.02	47.89
EES14737	Sorghum	cytosol	48.02	47.89
OQU80118	Sorghum	cytosol	16.1	46.72
EER87831	Sorghum	cytosol	46.61	46.61
EES14743	Sorghum	cytosol, mitochondrion, plastid	46.33	45.56
KXG24755	Sorghum	mitochondrion	48.31	45.48
EER99574	Sorghum	cytosol	46.33	44.93
KXG24752	Sorghum	cytosol	20.9	44.85
KXG24756	Sorghum	cytosol	44.63	44.51
EES13596	Sorghum	mitochondrion	42.37	43.23
KXG24747	Sorghum	cytosol	43.5	43.02
OQU80150	Sorghum	plastid	42.37	42.98
OQU80119	Sorghum	cytosol	44.35	41.42
EES13585	Sorghum	cytosol, plastid	42.94	39.38
EES08963	Sorghum	cytosol	42.09	39.21
KXG25976	Sorghum	cytosol	12.99	38.02
KXG27151	Sorghum	plastid	38.7	35.49
OQU82372	Sorghum	plastid	34.18	35.48
OQU82373	Sorghum	cytosol, plastid	33.33	34.81
EER99824	Sorghum	plastid	41.24	34.27
EER90755	Sorghum	cytosol	41.53	34.27
EES11455	Sorghum	cytosol	31.07	33.95
KXG34465	Sorghum	cytosol	41.53	33.33
EER97813	Sorghum	plastid	37.29	32.84
EES11459	Sorghum	plastid	35.31	32.81
KXG24406	Sorghum	cytosol	37.01	31.19
KXG24338	Sorghum	cytosol	33.62	25.11

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
UniProt:C5YIZ2	EnsemblPlants:EES14728	ProteinID:EES14728	ProteinID:EES14728.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF223	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3007G080600	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A87E53	RefSeq:XP_002445233.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9568433..9569528

Molecular Weight (calculated)

39773.3 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.218

Length

354 amino acids

Sequence
(BLAST)

001: MGSEPKRTES SHTTEEETGT HLFKIIGYTL TKGRGVGKSI RSGIFTVGGY DWAIRFYPDG STEATKDSVV VSLVLMSENA EVRASYDLSL VNQTTGLPEN
101: VFRESTFRVF NSCKGNWFTP RIIISKRNKL EFKSADYIVD DCLKIECTIT VLKESWVETT GDFEIEVPDT DLPEHFGKLL SEKEGADVTF SVGGETFPAH
201: KIAQLYGQMK ESRARKITVD DMQPDVFKAL LNFIYTDSLP ADWDDLDHYE YCEIAKLLLI AADRYAMDRL KLLCASILVE YLDVESVATT LALADQHNCN
301: CLKEVCVEFM ASLDEIDALV ETEGYATLKR TCPSILVDAL EKRSKYRKTG CQLN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.