CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05529

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06190.1	EES05529	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022366_P001	Maize	plastid	97.18	98.1
Zm00001d007068_P001	Maize	plastid	97.42	97.42
HORVU2Hr1G023850.1	Barley	cytosol, plastid	84.27	91.58
Os07t0655300-01	Rice	plastid	91.31	89.63
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	87.09	87.29
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	87.09	87.29
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	86.85	87.06
VIT_07s0104g00570.t01	Wine grape	cytosol	72.3	76.62
GSMUA_Achr6P23740_001	Banana	plastid	73.71	75.48
GSMUA_Achr6P16160_001	Banana	plastid	73.71	75.3
VIT_05s0020g02520.t01	Wine grape	plastid	71.6	74.75
KXG25976	Sorghum	cytosol	21.13	74.38
PGSC0003DMT400009802	Potato	plastid	70.42	73.53
Solyc09g072980.2.1	Tomato	cytosol	70.89	73.3
KRG95474	Soybean	plastid	69.72	72.44
KRH31976	Soybean	plastid	69.95	72.16
KRH71465	Soybean	plastid	69.48	71.84
KRH67156	Soybean	plastid	68.08	70.73
CDY58342	Canola	cytosol	65.26	68.98
Bra001186.1-P	Field mustard	cytosol	65.26	68.98
CDY66705	Canola	cytosol	65.02	68.73
CDY08064	Canola	cytosol	65.49	68.55
Bra002200.1-P	Field mustard	cytosol	64.32	68.5
CDY24708	Canola	cytosol	64.55	68.24
Bra020764.1-P	Field mustard	cytosol	61.5	68.05
Bra006489.1-P	Field mustard	cytosol	64.08	67.74
CDY05245	Canola	cytosol	62.91	67.68
Bra040233.1-P	Field mustard	cytosol	61.5	67.35
AT3G06190.1	Thale cress	cytosol	64.08	67.24
Solyc01g080250.2.1	Tomato	plastid	63.15	66.09
PGSC0003DMT400011115	Potato	plastid	62.68	65.6
AT5G19000.2	Thale cress	plastid	67.37	64.93
CDY13941	Canola	cytosol	64.55	62.64
CDX92567	Canola	cytosol	64.08	62.19
CDX70860	Canola	cytosol	64.08	62.05
CDY18844	Canola	cytosol	61.74	61.31
CDY02591	Canola	cytosol	56.57	60.25
EER97813	Sorghum	plastid	52.11	55.22
EER90755	Sorghum	cytosol	52.82	52.45
KXG34465	Sorghum	cytosol	53.29	51.47
EES14728	Sorghum	cytosol	34.27	41.24
KXG24752	Sorghum	cytosol	15.96	41.21
OQU80115	Sorghum	cytosol	33.57	40.86
EES13596	Sorghum	mitochondrion	33.1	40.63
EES14743	Sorghum	cytosol, mitochondrion, plastid	34.27	40.56
KXG24742	Sorghum	mitochondrion	34.04	40.17
EES14736	Sorghum	cytosol	32.39	38.87
OQU80150	Sorghum	plastid	31.69	38.68
EER87831	Sorghum	cytosol	31.69	38.14
KXG27151	Sorghum	plastid	34.51	38.08
OQU82372	Sorghum	plastid	30.28	37.83
KXG24755	Sorghum	mitochondrion	33.33	37.77
KXG24756	Sorghum	cytosol	31.46	37.75
EER99574	Sorghum	cytosol	31.92	37.26
OQU82373	Sorghum	cytosol, plastid	29.58	37.17
OQU80119	Sorghum	cytosol	32.63	36.68
EES14737	Sorghum	cytosol	29.81	35.77
EES08963	Sorghum	cytosol	31.69	35.53
KXG24747	Sorghum	cytosol	29.81	35.47
OQU80118	Sorghum	cytosol	10.09	35.25
EES13585	Sorghum	cytosol, plastid	30.52	33.68
EES11455	Sorghum	cytosol	25.59	33.64
EES11459	Sorghum	plastid	29.58	33.07
KXG24406	Sorghum	cytosol	30.52	30.95
KXG24338	Sorghum	cytosol	26.76	24.05

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8072230	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5X441	EnsemblPlants:EER99824	ProteinID:EER99824	ProteinID:EER99824.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	EnsemblPlantsGene:SORBI_3002G400000	SUPFAM:SSF49599	SUPFAM:SSF54695	unigene:Sbi.14505
InterPro:TRAF-like	UniParc:UPI0001A83F0F	RefSeq:XP_002463303.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:75084499..75090039

Molecular Weight (calculated)

46397.6 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.079

Length

426 amino acids

Sequence
(BLAST)

001: MGAGRVCRGG PSSAHPAAGA GAGRPFPPLA ASSSAFPSSA PSETASTSVT KTVNGSHHFK IAGYSLSKGI GVGKFIASES FNVGGFDWAI YFYPDGKSGE
101: DGAAYVSLFI ALASEGTDVR ALFELTLVDQ SGKGQDKVHT HFGRSLESGP YTLKYRGSMW GYKRFFKRTA LETSDYLKDD CLLVNCTVGV VQSHTEGPKI
201: YTIPVPRSNM ALHIGQLLTS GKRTDIAFEV DGEMFPAHKV ILSARSPVFR AQLFGPMKDK NMKCIKIEDM EAPVFKALLH FMYWDELPDI EELTGVNTTW
301: VSTLMAQHLL AAADRYALER LKLLCELKLC EDVAINTVAN TLALAEQHHC YQLKTVCLKF VALPENLKAV MQTDGFDYLQ QSCPSLLTEL LEYVAKVGDH
401: SVSPCLYSTE VLDGGDANGR RVKPRI

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.