Factsheet for Bra020764.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016291.1-P
Bra024680.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06190.1	Bra016291.1-P	AT1G26830.1	15772280
AT3G06190.1	Bra024680.1-P	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24708	Canola	cytosol	97.92	93.55
Bra001186.1-P	Field mustard	cytosol	89.87	85.86
Bra040233.1-P	Field mustard	cytosol	83.64	82.78
AT3G06190.1	Thale cress	cytosol	87.27	82.76
Bra002200.1-P	Field mustard	cytosol	76.62	73.75
Bra006489.1-P	Field mustard	cytosol	76.88	73.45
VIT_05s0020g02520.t01	Wine grape	plastid	71.69	67.65
HORVU2Hr1G023850.1	Barley	cytosol, plastid	66.49	65.31
GSMUA_Achr6P16160_001	Banana	plastid	69.09	63.79
Solyc01g080250.2.1	Tomato	plastid	66.75	63.15
GSMUA_Achr6P23740_001	Banana	plastid	68.05	62.98
PGSC0003DMT400011115	Potato	plastid	66.23	62.65
Zm00001d022366_P001	Maize	plastid	68.05	62.09
EER99824	Sorghum	plastid	68.05	61.5
Zm00001d007068_P001	Maize	plastid	67.79	61.27
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	67.27	60.94
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	67.27	60.94
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	67.27	60.94
Os07t0655300-01	Rice	plastid	68.57	60.83
Bra000147.1-P	Field mustard	cytosol	52.21	52.62
Bra017053.1-P	Field mustard	cytosol	52.99	51.13
Bra036437.1-P	Field mustard	plastid	56.1	48.43
Bra006591.1-P	Field mustard	plastid	51.43	48.29
Bra020142.1-P	Field mustard	plastid	49.35	45.78

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra020764
EnsemblPlants:Bra020764.1	EnsemblPlants:Bra020764.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	UniProt:M4DW70	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0002545F5B	:	:

Description

AT3G06190 (E=2e-161) ATBPM2, BPM2 | BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding

Coordinates

chrA02:+:23214655..23216473

Molecular Weight (calculated)

43071.2 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.216

Length

385 amino acids

Sequence
(BLAST)

001: MDAIRVCAEE VPGSSRPTLT ESTSRTETIN GSHEFKISGY SLAKGIGIGK YVASDTFTVG GFSWAIYFYP DGKSPEDNSL YVSLFIALAS EGADVRALFE
101: LTLVDQSGNE RHKVHSHFGR TLESGPYTLK YRGSMWGYKR FFKRTLLEES DYLKDDCLLV RCCVGVVKSS TEGPRSYNIP VPGSDLGYQF GKVLESGRGA
201: DVALLVDGET FLAHRVVLAA RSPVFRAQLF GPLRNKNTKR INIEDIEAPI FKMFLHFIYW DELPDMEDLM GTDLKWASTL VAQHLLAAAD RYALERLRTI
301: CESKLCEGIS INTVATTLAL AEQHHSVMET DGFDYLKESC PGLLSELLEY VARLSEHSLA SSWNRKEFFP DGCDVNGRRV KQRLH

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.