Factsheet for Bra006489.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66705	Canola	cytosol	98.51	98.51
Bra002200.1-P	Field mustard	cytosol	84.37	85.0
Bra040233.1-P	Field mustard	cytosol	75.93	78.66
Bra001186.1-P	Field mustard	cytosol	78.66	78.66
AT5G19000.2	Thale cress	plastid	85.86	78.28
Bra020764.1-P	Field mustard	cytosol	73.45	76.88
VIT_05s0020g02520.t01	Wine grape	plastid	72.21	71.32
HORVU2Hr1G023850.1	Barley	cytosol, plastid	66.0	67.86
GSMUA_Achr6P16160_001	Banana	plastid	69.48	67.15
GSMUA_Achr6P23740_001	Banana	plastid	68.73	66.59
Zm00001d022366_P001	Maize	plastid	68.24	65.17
Solyc01g080250.2.1	Tomato	plastid	65.26	64.62
Zm00001d007068_P001	Maize	plastid	68.24	64.55
PGSC0003DMT400011115	Potato	plastid	65.01	64.37
EER99824	Sorghum	plastid	67.74	64.08
Os07t0655300-01	Rice	plastid	68.98	64.06
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	67.0	63.53
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	67.0	63.53
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	67.0	63.53
Bra017053.1-P	Field mustard	cytosol	54.84	55.39
Bra000147.1-P	Field mustard	cytosol	52.36	55.24
Bra006591.1-P	Field mustard	plastid	51.36	50.49
Bra036437.1-P	Field mustard	plastid	55.34	50.0
Bra020142.1-P	Field mustard	plastid	48.64	47.23

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
EnsemblPlantsGene:Bra006489	EnsemblPlants:Bra006489.1	EnsemblPlants:Bra006489.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	UniProt:M4CQK0	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000253FEDB
SEG:seg	:	:	:	:	:

Description

AT5G19000 (E=3e-177) ATBPM1 | ATBPM1 (BTB-POZ and MATH domain 1); protein binding

Coordinates

chrA03:+:3761458..3763426

Molecular Weight (calculated)

44626.1 Da

IEP (calculated)

7.327

GRAVY (calculated)

-0.244

Length

403 amino acids

Sequence
(BLAST)

001: MNKTRVCGEV SKSPSKPLTS STSVTETVNG FHEFKISGYS LTKGVGVGKY VASDTFTVGG HSWAVYFYPD GKSPEDNSSH VSLFIALASE GADVRALFEL
101: TLVDQSGNEK HKVHSHFGRA LESGPYTLKY RGSMWGYKRF FRRDSLETSD YLKDDSLLVR CRVGVVKSCT EGPRDYNINV PVSNLGQQLG SLLESGKGCD
201: VTFEVDGETF SAHKLVLATR SRVFRAQLFG PLRDRDTDGI EIEDVEASIF KVLLHFIYWD ELPDMQELIG TDSKSASTLV AQHLLAAADR YALERLKAIC
301: ESKLCEGITV NTVATTLALA EQLHCFQLKA VCLKFVASPE NLKAVMQTDG FDYLKRSCPS LLTELLKYLA RLREHSVTAP GHPKDIFADG CDSNGRRVKQ
401: RLH

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.