Factsheet for Zm00001d022366_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018043_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G06190.1	Zm00001d018043_P001	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99824	Sorghum	plastid	98.1	97.18
Zm00001d007068_P001	Maize	plastid	97.87	96.95
HORVU2Hr1G023850.1	Barley	cytosol, plastid	84.6	91.07
Os07t0655300-01	Rice	plastid	91.23	88.71
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	87.2	86.59
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	87.2	86.59
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	86.97	86.35
VIT_07s0104g00570.t01	Wine grape	cytosol	72.99	76.62
GSMUA_Achr6P23740_001	Banana	plastid	74.41	75.48
GSMUA_Achr6P16160_001	Banana	plastid	74.41	75.3
VIT_05s0020g02520.t01	Wine grape	plastid	72.27	74.75
PGSC0003DMT400009802	Potato	plastid	71.09	73.53
Solyc09g072980.2.1	Tomato	cytosol	71.56	73.3
KRG95474	Soybean	plastid	70.38	72.44
KRH31976	Soybean	plastid	70.62	72.16
KRH71465	Soybean	plastid	70.14	71.84
KRH67156	Soybean	plastid	68.72	70.73
CDY66705	Canola	cytosol	66.11	69.23
CDY58342	Canola	cytosol	65.88	68.98
Bra001186.1-P	Field mustard	cytosol	65.88	68.98
CDY08064	Canola	cytosol	66.11	68.55
Bra002200.1-P	Field mustard	cytosol	64.69	68.25
CDY24708	Canola	cytosol	65.17	68.24
Bra006489.1-P	Field mustard	cytosol	65.17	68.24
Bra020764.1-P	Field mustard	cytosol	62.09	68.05
Bra040233.1-P	Field mustard	cytosol	62.56	67.87
CDY05245	Canola	cytosol	63.51	67.68
AT3G06190.1	Thale cress	cytosol	64.69	67.24
Solyc01g080250.2.1	Tomato	plastid	63.98	66.34
PGSC0003DMT400011115	Potato	plastid	63.51	65.85
AT5G19000.2	Thale cress	plastid	68.01	64.93
CDX70860	Canola	cytosol	65.17	62.5
CDY13941	Canola	cytosol	64.93	62.41
CDX92567	Canola	cytosol	64.45	61.96
CDY18844	Canola	cytosol	62.8	61.77
CDY02591	Canola	cytosol	57.11	60.25
Zm00001d013094_P001	Maize	cytosol	53.55	52.8
Zm00001d034400_P003	Maize	cytosol	53.32	52.57
Zm00001d018887_P002	Maize	cytosol	53.08	51.85
Zm00001d007888_P002	Maize	plastid	49.05	48.14
Zm00001d024349_P001	Maize	cytosol	29.15	34.26

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100191618	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:B4F9H2
InterPro:BPM_C	EMBL:BT033760	EMBL:BT053995	EMBL:BT088125	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	EMBL:KJ727933
InterPro:MATH/TRAF_dom	ProteinID:ONM60213.1	ProteinID:ONM60215.1	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00017B611C	EnsemblPlantsGene:Zm00001d022366	EnsemblPlants:Zm00001d022366_P001	EnsemblPlants:Zm00001d022366_T001
SEG:seg	:	:	:	:	:

Description

math-btb15BTB/POZ and MATH domain-containing protein 2

Coordinates

chr7:-:176169913..176179943

Molecular Weight (calculated)

46026.1 Da

IEP (calculated)

6.932

GRAVY (calculated)

-0.086

Length

422 amino acids

Sequence
(BLAST)

001: MGAGRVCRGG PSSASPAAGR PFSTLAASSS ASPSSAPSET ASTSVTKTVN GSHHFKIAGY SLSKGIGVGK FIASESFNVG GFDWAIYFYP DGKSAEDGAA
101: YVSLFIALAS EGTDVRALFE LTLVDQSGKG QDKVHTHFGR SLESGPYTLK YRGSMWGYKR FFKRTALETS DYLKDDCLLV NCTVGVVQSH TEGPKIYTIP
201: VPRSNMALHI GQLLTSGKRT DIAFEVDGEM FPAHKVILSA RSPVFRAQLF GPMKDKDMKC IKIEDMEAPV FKALLHFMYW DELPDIEELT GVNTTWVSTL
301: MAQHLLAAAD RYALERLKLL CELKLCEDVA INTVANTLAL AEQHHCYQLK TVCLKFVALP ENLKAVMQTD GFDYLQQSCP SLLTELLEYV AKAGEHSVSP
401: CLYSTEVLDG GDANGRRVKP RI

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.