Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX92567 | Canola | cytosol | 92.71 | 92.71 |
CDY66705 | Canola | cytosol | 77.45 | 84.37 |
CDX70860 | Canola | cytosol | 83.83 | 83.64 |
AT5G19000.2 | Thale cress | plastid | 82.46 | 81.9 |
CDY58342 | Canola | cytosol | 71.75 | 78.16 |
CDY08064 | Canola | cytosol | 71.53 | 77.15 |
CDY05245 | Canola | cytosol | 69.02 | 76.52 |
CDY24708 | Canola | cytosol | 69.48 | 75.68 |
CDY02591 | Canola | cytosol | 68.11 | 74.75 |
CDY18844 | Canola | cytosol | 72.44 | 74.13 |
VIT_05s0020g02520.t01 | Wine grape | plastid | 65.38 | 70.34 |
HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 61.05 | 68.37 |
GSMUA_Achr6P23740_001 | Banana | plastid | 62.19 | 65.62 |
Zm00001d022366_P001 | Maize | plastid | 62.41 | 64.93 |
EER99824 | Sorghum | plastid | 62.64 | 64.55 |
GSMUA_Achr6P16160_001 | Banana | plastid | 61.28 | 64.51 |
Zm00001d007068_P001 | Maize | plastid | 62.41 | 64.32 |
Os07t0655300-01 | Rice | plastid | 62.87 | 63.59 |
TraesCS2B01G159700.1 | Wheat | mitochondrion, plastid | 61.5 | 63.53 |
TraesCS2D01G138300.1 | Wheat | mitochondrion, plastid | 61.5 | 63.53 |
TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 61.5 | 63.53 |
Solyc01g080250.2.1 | Tomato | plastid | 56.95 | 61.43 |
PGSC0003DMT400011115 | Potato | plastid | 56.72 | 61.18 |
CDX93238 | Canola | cytosol | 48.52 | 53.79 |
CDY07031 | Canola | cytosol | 48.75 | 53.63 |
CDY07638 | Canola | cytosol | 47.61 | 52.25 |
CDY61778 | Canola | cytosol | 48.06 | 50.0 |
CDX70957 | Canola | plastid | 45.33 | 48.54 |
CDY29955 | Canola | plastid | 49.43 | 48.33 |
CDX88828 | Canola | plastid | 45.1 | 48.29 |
CDY09093 | Canola | cytosol, plastid | 38.04 | 45.5 |
CDY71585 | Canola | cytosol | 19.13 | 41.58 |
CDY16586 | Canola | cytosol | 15.49 | 39.08 |
CDY67137 | Canola | endoplasmic reticulum | 30.98 | 38.2 |
CDX93236 | Canola | cytosol | 31.66 | 34.07 |
Protein Annotations
Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A078FLE5 | InterPro:BPM_C |
InterPro:BTB/POZ_dom | EnsemblPlants:CDY13941 | ProteinID:CDY13941 | ProteinID:CDY13941.1 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00078426001 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF37 | InterPro:SKP1/BTB/POZ_sf |
SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0004EEA0F7 |
SEG:seg | : | : | : | : | : |
Description
BnaC09g38850DBnaC09g38850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLE5]
Coordinates
chrLK032039:+:332292..334491
Molecular Weight (calculated)
49127.9 Da
IEP (calculated)
7.286
GRAVY (calculated)
-0.127
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPEVSRSP TKSPLTVSTS LTETVDGFHE FKISSYSLTK GLGVGKFVAS ETFNVGDYTW AIYFYPDGKS PEDNSSYVSL FIALASEGAD VRALFELTLV
101: DQSGNGKHKV HSHFGRALES GPYTLKYRGS MWGYKRFFKK STLESSDYIK DNSLLVRCRV GVVKSCTEGQ RNYNIPVPVS NLGQQFGNLL ESGKGCDVTF
201: EVDEETFSAH KLVLAARSPV FRAQLFGPLR DRNTDRIEIE DMESPIFKVL SFWDCICLVW IFYSRMYHPG SSPGALLLLL SLLTQDKVLL HFIYWDELPD
301: MQELMGIDSK SASTLVAQHL LVVADRYALE RLKVICESRL CEGITINTAA TTLALAEQHH CFQLKAVCLK FVSLPENLKA VMQTDGFDYL KKSCPSLLTE
401: LLKYVARLGE HSVSASGYRK EMFADGCDAN GRRVKQRLH
101: DQSGNGKHKV HSHFGRALES GPYTLKYRGS MWGYKRFFKK STLESSDYIK DNSLLVRCRV GVVKSCTEGQ RNYNIPVPVS NLGQQFGNLL ESGKGCDVTF
201: EVDEETFSAH KLVLAARSPV FRAQLFGPLR DRNTDRIEIE DMESPIFKVL SFWDCICLVW IFYSRMYHPG SSPGALLLLL SLLTQDKVLL HFIYWDELPD
301: MQELMGIDSK SASTLVAQHL LVVADRYALE RLKVICESRL CEGITINTAA TTLALAEQHH CFQLKAVCLK FVSLPENLKA VMQTDGFDYL KKSCPSLLTE
401: LLKYVARLGE HSVSASGYRK EMFADGCDAN GRRVKQRLH
001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLPLT LLLIVYSRMY HPGSSPGALL LFSSLLTRDK VLLHFIYWDE
301: LPDMQELIGT DSTLASTLVA QHLLAAADRY ALERLKAICE SKLCEGVAIN TVATTLALAE QHHCLQLKAV CLKFVALPEN LKAVMQTDGF DYLKESCPSL
401: LTELLQYVAR LSEHSVIVSG HRKEIFADGC DASGRRVKPR LH
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLPLT LLLIVYSRMY HPGSSPGALL LFSSLLTRDK VLLHFIYWDE
301: LPDMQELIGT DSTLASTLVA QHLLAAADRY ALERLKAICE SKLCEGVAIN TVATTLALAE QHHCLQLKAV CLKFVALPEN LKAVMQTDGF DYLKESCPSL
401: LTELLQYVAR LSEHSVIVSG HRKEIFADGC DASGRRVKPR LH
Arabidopsis Description
BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.