Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06190.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001186.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY08064 | Canola | cytosol | 99.5 | 98.53 |
| CDY05245 | Canola | cytosol | 90.32 | 91.92 |
| CDY24708 | Canola | cytosol | 90.82 | 90.82 |
| AT3G06190.1 | Thale cress | cytosol | 91.07 | 90.39 |
| CDY18844 | Canola | cytosol | 86.85 | 81.59 |
| CDY66705 | Canola | cytosol | 79.16 | 79.16 |
| VIT_05s0020g02520.t01 | Wine grape | plastid | 74.44 | 73.53 |
| CDX70860 | Canola | cytosol | 79.65 | 72.95 |
| CDX92567 | Canola | cytosol | 78.41 | 71.98 |
| CDY13941 | Canola | cytosol | 78.16 | 71.75 |
| CDY02591 | Canola | cytosol | 69.48 | 70.0 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 67.0 | 68.88 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 69.73 | 67.55 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 69.73 | 67.39 |
| Solyc01g080250.2.1 | Tomato | plastid | 67.25 | 66.58 |
| PGSC0003DMT400011115 | Potato | plastid | 66.75 | 66.09 |
| Zm00001d022366_P001 | Maize | plastid | 68.98 | 65.88 |
| EER99824 | Sorghum | plastid | 68.98 | 65.26 |
| Zm00001d007068_P001 | Maize | plastid | 68.73 | 65.02 |
| Os07t0655300-01 | Rice | plastid | 69.98 | 64.98 |
| TraesCS2D01G138300.1 | Wheat | mitochondrion, plastid | 67.99 | 64.47 |
| TraesCS2B01G159700.1 | Wheat | mitochondrion, plastid | 67.99 | 64.47 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 67.99 | 64.47 |
| CDX93238 | Canola | cytosol | 55.83 | 56.82 |
| CDY07031 | Canola | cytosol | 55.34 | 55.89 |
| CDY07638 | Canola | cytosol | 55.09 | 55.5 |
| CDY61778 | Canola | cytosol | 55.58 | 53.08 |
| CDX70957 | Canola | plastid | 52.85 | 51.95 |
| CDX88828 | Canola | plastid | 52.61 | 51.71 |
| CDY29955 | Canola | plastid | 56.58 | 50.78 |
| CDY09093 | Canola | cytosol, plastid | 45.66 | 50.14 |
| CDY71585 | Canola | cytosol | 21.59 | 43.07 |
| CDY16586 | Canola | cytosol | 17.62 | 40.8 |
| CDY67137 | Canola | endoplasmic reticulum | 35.98 | 40.73 |
| CDX93236 | Canola | cytosol | 37.22 | 36.76 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A078J5R4 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | EnsemblPlants:CDY58342 | ProteinID:CDY58342 | ProteinID:CDY58342.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00023476001 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF37 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0002540AAB |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g57430DBnaA03g57430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5R4]
Coordinates
chrLK033659:+:44678..46999
Molecular Weight (calculated)
45008.8 Da
IEP (calculated)
6.828
GRAVY (calculated)
-0.211
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATRVCSEV PGSSKSSLTE STSRTETING SHEFKISGYS LAKGMGIGKY VASDTFMVGG YSWAIYFYPD GKSPEDNSVY VSLFIALASE GADVRALFEL
101: TLVDQSGNER HKVHSHFGRT LESGPYTLKY RGSMWGYKRF FKRTLLESSD YLKDNCLLVR CCVGVVKSHT EGPRSYNIPV PVSDLGHQFG KLLESGKGVD
201: VTFQVDGETF PAHTLVLAAR SPVFRAQLFG PLKNQNTKRI EIEDMEAPIF KMFLHFIYWD ELPDMEDIMG TDLKWASTLV AQHLLAAADR YALERLRTIC
301: ESKLCEGISI NTVATTLALA EQHHCFQLKA ACLKFIALPQ NLKAVMETDG FDYLKESCPC LLSELLEYVA RLSEHSLTST GQRKELYADG GDVNGRRVKQ
401: RLH
101: TLVDQSGNER HKVHSHFGRT LESGPYTLKY RGSMWGYKRF FKRTLLESSD YLKDNCLLVR CCVGVVKSHT EGPRSYNIPV PVSDLGHQFG KLLESGKGVD
201: VTFQVDGETF PAHTLVLAAR SPVFRAQLFG PLKNQNTKRI EIEDMEAPIF KMFLHFIYWD ELPDMEDIMG TDLKWASTLV AQHLLAAADR YALERLRTIC
301: ESKLCEGISI NTVATTLALA EQHHCFQLKA ACLKFIALPQ NLKAVMETDG FDYLKESCPC LLSELLEYVA RLSEHSLTST GQRKELYADG GDVNGRRVKQ
401: RLH
001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
Arabidopsis Description
BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.