CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66705	Canola	cytosol	74.25	73.7
CDY58342	Canola	cytosol	70.0	69.48
CDY05245	Canola	cytosol	68.5	69.19
CDX70860	Canola	cytosol	76.0	69.09
CDY08064	Canola	cytosol	70.0	68.8
AT5G19000.2	Thale cress	plastid	75.75	68.55
CDY13941	Canola	cytosol	74.75	68.11
CDX92567	Canola	cytosol	74.25	67.65
CDY24708	Canola	cytosol	68.0	67.49
CDY18844	Canola	cytosol	69.5	64.8
VIT_05s0020g02520.t01	Wine grape	plastid	64.25	62.99
HORVU2Hr1G023850.1	Barley	cytosol, plastid	59.5	60.71
GSMUA_Achr6P23740_001	Banana	plastid	60.75	58.41
GSMUA_Achr6P16160_001	Banana	plastid	60.5	58.03
Zm00001d022366_P001	Maize	plastid	60.25	57.11
Solyc01g080250.2.1	Tomato	plastid	57.75	56.76
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	60.25	56.71
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	60.25	56.71
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	60.25	56.71
Zm00001d007068_P001	Maize	plastid	60.25	56.57
EER99824	Sorghum	plastid	60.25	56.57
PGSC0003DMT400011115	Potato	plastid	57.5	56.51
Os07t0655300-01	Rice	plastid	61.25	56.45
CDX93238	Canola	cytosol	48.5	48.99
CDY07031	Canola	cytosol	48.5	48.62
CDY07638	Canola	cytosol	47.75	47.75
CDY61778	Canola	cytosol	48.25	45.73
CDX70957	Canola	plastid	45.5	44.39
CDX88828	Canola	plastid	45.25	44.15
CDY71585	Canola	cytosol	22.0	43.56
CDY29955	Canola	plastid	48.0	42.76
CDY09093	Canola	cytosol, plastid	37.5	40.87
CDY16586	Canola	cytosol	17.5	40.23
CDY67137	Canola	endoplasmic reticulum	32.0	35.96
CDX93236	Canola	cytosol	32.25	31.62

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
EnsemblPlants:CDY02591	ProteinID:CDY02591	ProteinID:CDY02591.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00114712001	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF37	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0004EE09DE	:	:

Description

BnaC02g08440D

Coordinates

chrLK031936:-:269927..273883

Molecular Weight (calculated)

45704.6 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.246

Length

400 amino acids

Sequence
(BLAST)

001: MDIWVDDYPT NKPLQYCQSQ CHASINYRLK FEFEKAMHIR YYSWAIYFYP DGKSPEPEDN TSYVSLFIAL ASEGTDVRAL FELTLVDQSG NGKHKVHSHF
101: ERALEKGPYT LKYRGSVWGY KRFFRRSGLE SSDYLKDNSL LGPRDYNISV PVSNLRQQLG KLLESGKGCD VTFVVDGETF YAHKLVLATR SPVFKAQLFG
201: PLRDRNTDRI KIDDMESPIF KDFVFFLSAY LPSCDVGWIL ECHNRFCDVL LHFIYWDELP DMQELIGTDS KSASTLVAQH LLAAADRYAL ERLKAICESK
301: LCEGITINTV ATTLALAEQH HCFQLKAVCL KFVALPENLK AVMQTDGFDY LKRSCPSLLT ELLEYVARLS EHSVIASGHR KEVVADGCDV NGRRVKQRLH

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.