Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66705 | Canola | cytosol | 78.51 | 86.1 |
| Bra006489.1-P | Field mustard | cytosol | 78.28 | 85.86 |
| CDX70860 | Canola | cytosol | 85.07 | 85.45 |
| Bra002200.1-P | Field mustard | cytosol | 76.7 | 84.75 |
| CDX92567 | Canola | cytosol | 82.35 | 82.92 |
| AT3G06190.1 | Thale cress | cytosol | 75.79 | 82.51 |
| CDY13941 | Canola | cytosol | 81.9 | 82.46 |
| CDY02591 | Canola | cytosol | 68.55 | 75.75 |
| VIT_05s0020g02520.t01 | Wine grape | plastid | 69.0 | 74.75 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 62.9 | 70.92 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 65.38 | 69.3 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 65.16 | 69.23 |
| Zm00001d022366_P001 | Maize | plastid | 64.93 | 68.01 |
| EER99824 | Sorghum | plastid | 64.93 | 67.37 |
| Zm00001d007068_P001 | Maize | plastid | 64.93 | 67.37 |
| Os07t0655300-01 | Rice | plastid | 65.84 | 67.05 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 63.8 | 66.35 |
| TraesCS2B01G159700.1 | Wheat | mitochondrion, plastid | 63.8 | 66.35 |
| TraesCS2D01G138300.1 | Wheat | mitochondrion, plastid | 63.8 | 66.35 |
| Solyc01g080250.2.1 | Tomato | plastid | 59.73 | 64.86 |
| PGSC0003DMT400011115 | Potato | plastid | 59.5 | 64.62 |
| AT2G39760.1 | Thale cress | cytosol | 52.71 | 57.11 |
| AT5G21010.1 | Thale cress | cytosol | 48.19 | 51.95 |
| AT3G43700.1 | Thale cress | plastid | 47.06 | 50.12 |
| AT3G03740.1 | Thale cress | cytosol | 49.09 | 46.67 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:832018 | UniProt:A0A178UFC0 |
| ProteinID:AED92638.1 | ArrayExpress:AT5G19000 | EnsemblPlantsGene:AT5G19000 | RefSeq:AT5G19000 | TAIR:AT5G19000 | RefSeq:AT5G19000-TAIR-G |
| EnsemblPlants:AT5G19000.2 | TAIR:AT5G19000.2 | Symbol:ATBPM1 | Unigene:At.20179 | Symbol:BPM1 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR002083 |
| InterPro:IPR008974 | InterPro:MATH/TRAF_dom | RefSeq:NP_001190334.1 | ProteinID:OAO92606.1 | PFAM:PF00651 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025281 | PFscan:PS50097 | PFscan:PS50144 |
| PANTHER:PTHR24411 | PANTHER:PTHR24411:SF37 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 |
| SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI00001624EB | SEG:seg | : | : |
Description
BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
Coordinates
chr5:+:6342220..6344674
Molecular Weight (calculated)
48586.4 Da
IEP (calculated)
7.714
GRAVY (calculated)
-0.008
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLPLT LLLIVYSRMY HPGSSPGALL LFSSLLTRDK VLLHFIYWDE
301: LPDMQELIGT DSTLASTLVA QHLLAAADRY ALERLKAICE SKLCEGVAIN TVATTLALAE QHHCLQLKAV CLKFVALPEN LKAVMQTDGF DYLKESCPSL
401: LTELLQYVAR LSEHSVIVSG HRKEIFADGC DASGRRVKPR LH
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLPLT LLLIVYSRMY HPGSSPGALL LFSSLLTRDK VLLHFIYWDE
301: LPDMQELIGT DSTLASTLVA QHLLAAADRY ALERLKAICE SKLCEGVAIN TVATTLALAE QHHCLQLKAV CLKFVALPEN LKAVMQTDGF DYLKESCPSL
401: LTELLQYVAR LSEHSVIVSG HRKEIFADGC DASGRRVKPR LH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.