CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006489.1-P	Field mustard	cytosol	98.51	98.51
CDX70860	Canola	cytosol	96.28	88.18
CDY58342	Canola	cytosol	79.16	79.16
AT5G19000.2	Thale cress	plastid	86.1	78.51
CDY08064	Canola	cytosol	78.91	78.13
CDY05245	Canola	cytosol	76.18	77.53
CDX92567	Canola	cytosol	84.37	77.45
CDY13941	Canola	cytosol	84.37	77.45
CDY24708	Canola	cytosol	77.42	77.42
CDY02591	Canola	cytosol	73.7	74.25
CDY18844	Canola	cytosol	76.43	71.79
VIT_05s0020g02520.t01	Wine grape	plastid	72.46	71.57
HORVU2Hr1G023850.1	Barley	cytosol, plastid	67.0	68.88
GSMUA_Achr6P16160_001	Banana	plastid	69.98	67.63
GSMUA_Achr6P23740_001	Banana	plastid	69.48	67.31
Zm00001d022366_P001	Maize	plastid	69.23	66.11
Zm00001d007068_P001	Maize	plastid	69.23	65.49
Os07t0655300-01	Rice	plastid	70.22	65.21
EER99824	Sorghum	plastid	68.73	65.02
Solyc01g080250.2.1	Tomato	plastid	65.26	64.62
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	67.99	64.47
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	67.99	64.47
TraesCS2B01G159700.1	Wheat	mitochondrion, plastid	67.99	64.47
PGSC0003DMT400011115	Potato	plastid	65.01	64.37
CDX93238	Canola	cytosol	55.58	56.57
CDY07031	Canola	cytosol	55.09	55.64
CDY07638	Canola	cytosol	54.09	54.5
CDY61778	Canola	cytosol	54.59	52.13
CDX70957	Canola	plastid	51.86	50.98
CDX88828	Canola	plastid	51.61	50.73
CDY29955	Canola	plastid	55.34	49.67
CDY09093	Canola	cytosol, plastid	43.92	48.23
CDY71585	Canola	cytosol	21.09	42.08
CDY16586	Canola	cytosol	16.87	39.08
CDY67137	Canola	endoplasmic reticulum	34.49	39.04
CDX93236	Canola	cytosol	37.47	37.01

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078JJU0	InterPro:BPM_C
InterPro:BTB/POZ_dom	EnsemblPlants:CDY66705	ProteinID:CDY66705	ProteinID:CDY66705.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00055609001	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF37
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0004EE9F3F	SEG:seg	:	:	:	:

Description

BnaAnng22770DBnaAnng22770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJU0]

Coordinates

chrLK035419:+:174..2572

Molecular Weight (calculated)

44757.2 Da

IEP (calculated)

7.352

GRAVY (calculated)

-0.274

Length

403 amino acids

Sequence
(BLAST)

001: MNKTRVCGEV SKSPSKPLTS STSVTETVNG FHEFKISGYS LTKGVGVGKY VASDTFTVGG HSWAIYFYPD GKSPEDNSSH VSLFIALASE GADVRALFEL
101: TLVDQSGNEK HKVHSHFGRA LESGPYTLKY RGSMWGYKRF FRRDSLETSD YLKDDSLLVR CRVGVVKSCT EGPRDYNINV PVSNLGQQLG SLLESGKGCD
201: VTFEVDGETF SAHKLVLATR SRVFRAQLFG PLRDRDTDRI EIEDVEASIF KVLLHFIYWD ELPDMQELIG TDSKSASTLV AQHLLAAADR YALERLKAIC
301: ESKLCEGITV NTVATTLALA EQHHCFQLKE VCLKFVASPE NLKAVMQTDG FDYLKRSCPS LLTELLKYLA RLREHSVTAP GHPKDIVADG CDANGRRVKQ
401: RLH

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.