Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06190.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT3G06190.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040233.1-P | Field mustard | cytosol | 90.21 | 99.49 |
| CDY58342 | Canola | cytosol | 81.59 | 86.85 |
| CDY08064 | Canola | cytosol | 81.82 | 86.24 |
| AT3G06190.1 | Thale cress | cytosol | 80.89 | 85.47 |
| CDY24708 | Canola | cytosol | 79.49 | 84.62 |
| CDY05245 | Canola | cytosol | 77.86 | 84.34 |
| CDY66705 | Canola | cytosol | 71.79 | 76.43 |
| CDX70860 | Canola | cytosol | 74.83 | 72.95 |
| CDX92567 | Canola | cytosol | 74.36 | 72.67 |
| CDY13941 | Canola | cytosol | 74.13 | 72.44 |
| CDY02591 | Canola | cytosol | 64.8 | 69.5 |
| VIT_05s0020g02520.t01 | Wine grape | plastid | 65.97 | 69.36 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 60.84 | 66.58 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 62.7 | 64.51 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 62.47 | 64.42 |
| Solyc01g080250.2.1 | Tomato | plastid | 61.07 | 64.37 |
| PGSC0003DMT400011115 | Potato | plastid | 60.84 | 64.13 |
| Zm00001d022366_P001 | Maize | plastid | 61.77 | 62.8 |
| Zm00001d007068_P001 | Maize | plastid | 61.77 | 62.21 |
| TraesCS2B01G159700.1 | Wheat | mitochondrion, plastid | 61.54 | 62.12 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 61.54 | 62.12 |
| TraesCS2D01G138300.1 | Wheat | mitochondrion, plastid | 61.54 | 62.12 |
| EER99824 | Sorghum | plastid | 61.31 | 61.74 |
| Os07t0655300-01 | Rice | plastid | 62.0 | 61.29 |
| CDX93238 | Canola | cytosol | 50.12 | 54.29 |
| CDY07031 | Canola | cytosol | 49.88 | 53.63 |
| CDY07638 | Canola | cytosol | 49.42 | 53.0 |
| CDY61778 | Canola | cytosol | 49.88 | 50.71 |
| CDX70957 | Canola | plastid | 47.79 | 50.0 |
| CDX88828 | Canola | plastid | 47.55 | 49.76 |
| CDY09093 | Canola | cytosol, plastid | 41.96 | 49.05 |
| CDY29955 | Canola | plastid | 50.58 | 48.33 |
| CDY71585 | Canola | cytosol | 20.05 | 42.57 |
| CDY16586 | Canola | cytosol | 16.78 | 41.38 |
| CDY67137 | Canola | endoplasmic reticulum | 32.17 | 38.76 |
| CDX93236 | Canola | cytosol | 33.1 | 34.8 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A078G047 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | EnsemblPlants:CDY18844 | ProteinID:CDY18844 | ProteinID:CDY18844.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00006020001 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom |
| PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF37 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0004EDDA54 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng03090DBnaAnng03090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G047]
Coordinates
chrLK032089:+:523628..526322
Molecular Weight (calculated)
48161.0 Da
IEP (calculated)
6.905
GRAVY (calculated)
-0.049
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATTESTSH TETLNGTHEF KISGYSLIKG MGVGKYVASE TFTLGGYSWA IYFYPDGKSP EDNSVYVSLF IALASEGADV RALFELTLVD QSGNERHKVH
101: SHFGRTLESG PYTLKYRGSM WGYKRFFKRS LLESSDYLKD NCLLVRCCVG LVKSRTEGPR SYNIPVPVSE FGRQFGKVLE SGRGADVTFR VDGETFPAHK
201: LVLAARSPVF RAQIFGPLKS RDTECIDIED MEAPIFKVPP FNSLLLSWFI AFSLVRKMGT ALILLIIHLF QILLTKHMFL HFIYWDELPD MQDVMGTDLK
301: WAATLVAQHL LAAADRYALE RLRTICESQL CEGISINTVA TTLALAEQHH CFQLKAACLK FIASPENLKA VMETDGFDYL KESCPCLLSE LLEYVARLSE
401: HSLASSGHGK ELYVEGCDVN GRRVKQRLH
101: SHFGRTLESG PYTLKYRGSM WGYKRFFKRS LLESSDYLKD NCLLVRCCVG LVKSRTEGPR SYNIPVPVSE FGRQFGKVLE SGRGADVTFR VDGETFPAHK
201: LVLAARSPVF RAQIFGPLKS RDTECIDIED MEAPIFKVPP FNSLLLSWFI AFSLVRKMGT ALILLIIHLF QILLTKHMFL HFIYWDELPD MQDVMGTDLK
301: WAATLVAQHL LAAADRYALE RLRTICESQL CEGISINTVA TTLALAEQHH CFQLKAACLK FIASPENLKA VMETDGFDYL KESCPCLLSE LLEYVARLSE
401: HSLASSGHGK ELYVEGCDVN GRRVKQRLH
001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
Arabidopsis Description
BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.