Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra016291.1-P | |
| Bra024680.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06190.1 | Bra016291.1-P | AT1G26830.1 | 15772280 |
| AT3G06190.1 | Bra024680.1-P | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18844 | Canola | cytosol | 99.49 | 90.21 |
| Bra001186.1-P | Field mustard | cytosol | 89.46 | 86.35 |
| AT3G06190.1 | Thale cress | cytosol | 89.46 | 85.71 |
| Bra020764.1-P | Field mustard | cytosol | 82.78 | 83.64 |
| Bra002200.1-P | Field mustard | cytosol | 79.43 | 77.25 |
| Bra006489.1-P | Field mustard | cytosol | 78.66 | 75.93 |
| VIT_05s0020g02520.t01 | Wine grape | plastid | 72.75 | 69.36 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 67.1 | 66.58 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 69.41 | 64.75 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 69.15 | 64.66 |
| Solyc01g080250.2.1 | Tomato | plastid | 67.35 | 64.37 |
| PGSC0003DMT400011115 | Potato | plastid | 67.1 | 64.13 |
| Zm00001d022366_P001 | Maize | plastid | 67.87 | 62.56 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 67.87 | 62.12 |
| TraesCS2B01G159700.1 | Wheat | mitochondrion, plastid | 67.87 | 62.12 |
| TraesCS2D01G138300.1 | Wheat | mitochondrion, plastid | 67.87 | 62.12 |
| Zm00001d007068_P001 | Maize | plastid | 67.87 | 61.97 |
| EER99824 | Sorghum | plastid | 67.35 | 61.5 |
| Os07t0655300-01 | Rice | plastid | 68.12 | 61.06 |
| Bra000147.1-P | Field mustard | cytosol | 53.47 | 54.45 |
| Bra017053.1-P | Field mustard | cytosol | 55.01 | 53.63 |
| Bra006591.1-P | Field mustard | plastid | 52.96 | 50.24 |
| Bra036437.1-P | Field mustard | plastid | 55.78 | 48.65 |
| Bra020142.1-P | Field mustard | plastid | 51.16 | 47.95 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| EnsemblPlantsGene:Bra040233 | EnsemblPlants:Bra040233.1 | EnsemblPlants:Bra040233.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | UniProt:M4FGK5 | InterPro:MATH/TRAF_dom | PFAM:PF00651 |
| PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF37 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 |
| SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI0002544CDF | SEG:seg |
Description
AT3G06190 (E=7e-198) ATBPM2, BPM2 | BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding
Coordinates
chrA01:-:28247400..28249573
Molecular Weight (calculated)
43601.1 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.180
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSITESTSH TETLNGTHEF KISGYSLIKG MGVGKYVASE TFTLGGYSWA IYFYPDGKSP EDNSVYVSLF IALASEGADV RALFELTLVD QSGNERHKVH
101: SHFGRTLESG PYTLKYRGSM WGYKRFFKRS LLESSDYLKD NCLLVRCCVG LVKSRTEGPR SYNIPVPVSE FGRQFGKVLE SGRGADVTFR VDGETFPAHK
201: LVLAARSPVF RAQIFGPLKS RDTECIDIED MEAPIFKMFL HFIYWDELPD MQDVMGTDLK WAATLVAQHL LAAADRYALE RLRTICESQL CEGISINTVA
301: TTLALAEQHH CFQLKAACLK FIASPENLKA VMETDGFDYL KESCPCLLSE LLEYVARLSE HSLASSGHGK ELYVEGCDVN GRRVKQRLH
101: SHFGRTLESG PYTLKYRGSM WGYKRFFKRS LLESSDYLKD NCLLVRCCVG LVKSRTEGPR SYNIPVPVSE FGRQFGKVLE SGRGADVTFR VDGETFPAHK
201: LVLAARSPVF RAQIFGPLKS RDTECIDIED MEAPIFKMFL HFIYWDELPD MQDVMGTDLK WAATLVAQHL LAAADRYALE RLRTICESQL CEGISINTVA
301: TTLALAEQHH CFQLKAACLK FIASPENLKA VMETDGFDYL KESCPCLLSE LLEYVARLSE HSLASSGHGK ELYVEGCDVN GRRVKQRLH
001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
Arabidopsis Description
BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.