Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra000147.1-P | |
Bra017053.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G21010.1 | Bra000147.1-P | AT2G39760.1 | 15618422 |
AT5G21010.1 | Bra017053.1-P | AT2G39760.1 | 15618422 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY09093 | Canola | cytosol, plastid | 83.13 | 94.01 |
Bra006591.1-P | Field mustard | plastid | 84.1 | 85.12 |
AT5G21010.1 | Thale cress | cytosol | 81.45 | 82.44 |
KXG25976 | Sorghum | cytosol | 22.65 | 77.69 |
KRH73429 | Soybean | cytosol, plastid | 63.13 | 66.16 |
KRH14738 | Soybean | cytosol | 62.89 | 65.91 |
HORVU5Hr1G104190.1 | Barley | cytosol | 64.1 | 65.84 |
GSMUA_Achr7P27230_001 | Banana | cytosol | 61.45 | 64.89 |
GSMUA_Achr4P14800_001 | Banana | cytosol | 60.96 | 64.38 |
VIT_06s0009g01030.t01 | Wine grape | cytosol | 65.3 | 64.07 |
GSMUA_Achr5P08970_001 | Banana | cytosol | 61.69 | 63.68 |
Solyc11g072070.1.1 | Tomato | cytosol | 61.69 | 62.75 |
PGSC0003DMT400070468 | Potato | cytosol | 61.69 | 62.75 |
PGSC0003DMT400058456 | Potato | cytosol | 61.2 | 62.72 |
TraesCS2B01G262200.1 | Wheat | cytosol | 63.86 | 62.21 |
TraesCS2A01G237800.1 | Wheat | cytosol | 63.86 | 62.21 |
TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 63.61 | 61.97 |
Solyc01g009060.2.1 | Tomato | cytosol | 60.24 | 61.73 |
Os07t0167200-01 | Rice | cytosol | 62.89 | 61.56 |
TraesCS5A01G429400.2 | Wheat | cytosol | 64.58 | 61.33 |
Zm00001d034400_P003 | Maize | cytosol | 62.65 | 60.75 |
TraesCS5B01G431400.2 | Wheat | cytosol | 63.86 | 60.64 |
Zm00001d013094_P001 | Maize | cytosol | 62.41 | 60.51 |
EER90755 | Sorghum | cytosol | 61.93 | 59.91 |
KXG34465 | Sorghum | cytosol | 62.41 | 58.73 |
Zm00001d018887_P002 | Maize | cytosol | 60.96 | 58.56 |
TraesCS5D01G437400.1 | Wheat | cytosol | 63.86 | 57.48 |
HORVU2Hr1G055140.1 | Barley | cytosol | 63.37 | 57.3 |
Bra036437.1-P | Field mustard | plastid | 60.72 | 56.5 |
Bra040233.1-P | Field mustard | cytosol | 47.95 | 51.16 |
Bra001186.1-P | Field mustard | cytosol | 49.4 | 50.87 |
Bra000147.1-P | Field mustard | cytosol | 45.78 | 49.74 |
Bra020764.1-P | Field mustard | cytosol | 45.78 | 49.35 |
Bra006489.1-P | Field mustard | cytosol | 47.23 | 48.64 |
Bra002200.1-P | Field mustard | cytosol | 46.75 | 48.5 |
Bra017053.1-P | Field mustard | cytosol | 46.51 | 48.37 |
Protein Annotations
Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
EnsemblPlantsGene:Bra020142 | EnsemblPlants:Bra020142.1 | EnsemblPlants:Bra020142.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | UniProt:M4DUE9 | InterPro:MATH/TRAF_dom | PFAM:PF00651 |
PFAM:PF00917 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF53 | InterPro:SKP1/BTB/POZ_sf |
SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI00025433D3 |
SEG:seg | : | : | : | : | : |
Description
AT5G21010 (E=4e-177) ATBPM5 | ATBPM5 (BTB-POZ and MATH domain 5); protein binding
Coordinates
chrA02:+:5240916..5243135
Molecular Weight (calculated)
45893.5 Da
IEP (calculated)
6.028
GRAVY (calculated)
-0.240
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSNPDRAS SPTSSRSVTK TVNGSHQFVI RGYRLAKGMG VGKHIASDNF SVGGYQWEIF FFPDGKNPED NSAYVSVFIA LASEGSEVRA LFELSLVDQS
101: GKGNHKVHSH FERTLDTGPY TLKYKGSMWG YKRFIRRTQL ETSDFLKDDC LIINCTVGVV VSEVQRPQLH SVRVPDSEIG SHFGVLLDSM EGSDVTFDIS
201: GEKFQAHKLV LAARSPFFKS KILNELGANN TEVTINDLEP KVFKALLQFM YRDSLPEDVE PVTTLTFEFL TLPEIYETLV VKLLEAAEKY GMNRLRLLCE
301: ARICKGVSVK SVAKILALAD RYKATELKSA CLLFTAENLA DAFNFTAVLE TDAYKEMKDE CLTLQSELLK AVAGYEEEGS HSSGEDKSQS VWAQLSDGGG
401: GGGDISSRHV RQRTI
101: GKGNHKVHSH FERTLDTGPY TLKYKGSMWG YKRFIRRTQL ETSDFLKDDC LIINCTVGVV VSEVQRPQLH SVRVPDSEIG SHFGVLLDSM EGSDVTFDIS
201: GEKFQAHKLV LAARSPFFKS KILNELGANN TEVTINDLEP KVFKALLQFM YRDSLPEDVE PVTTLTFEFL TLPEIYETLV VKLLEAAEKY GMNRLRLLCE
301: ARICKGVSVK SVAKILALAD RYKATELKSA CLLFTAENLA DAFNFTAVLE TDAYKEMKDE CLTLQSELLK AVAGYEEEGS HSSGEDKSQS VWAQLSDGGG
401: GGGDISSRHV RQRTI
001: MSESVIQGSN PDRVLSPTSS KSVTQTVNGS HQFVIQGYSL AKGMGIGKHI ASDNFSVGGY QWGIFFYPDG KNPEDNSSYV SVFIALASEG TEVRALFELA
101: LVDQSGKGKH KVHSHFERSL DGGPYTLKYR GSMWGYKRFF RRSILETSDY LKDDCLIINC TVGVVVSEIL CPQLHSVHVP DSELGSHFGV LLDSMEGSDI
201: TFNIAGEKFL AHKLVLAARS PFFKSKFFSE FEANNTEVTI NDLEPKVFKA LLQFMYKDSL PEDVEPATAH TFERLKLSEI YETLIVKVLA AADKYDLIRL
301: RLLCESHICK GVSVKSVAKI LALADRYNAK ELKGVCLKFT AENLAAVLET DAYQQMKDEC VTLQSELLKA VAGHEEGSNS TGGAKSQSVW AQLSDGGGDT
401: TSRHVRQRTT
101: LVDQSGKGKH KVHSHFERSL DGGPYTLKYR GSMWGYKRFF RRSILETSDY LKDDCLIINC TVGVVVSEIL CPQLHSVHVP DSELGSHFGV LLDSMEGSDI
201: TFNIAGEKFL AHKLVLAARS PFFKSKFFSE FEANNTEVTI NDLEPKVFKA LLQFMYKDSL PEDVEPATAH TFERLKLSEI YETLIVKVLA AADKYDLIRL
301: RLLCESHICK GVSVKSVAKI LALADRYNAK ELKGVCLKFT AENLAAVLET DAYQQMKDEC VTLQSELLKA VAGHEEGSNS TGGAKSQSVW AQLSDGGGDT
401: TSRHVRQRTT
Arabidopsis Description
BPM5BTB/POZ and MATH domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q1EBV6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.