Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G064920.1 | |
| HORVU6Hr1G075720.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G43700.1 | HORVU6Hr1G075720.2 | AT1G26830.1 | 15772280 |
| AT3G43700.1 | HORVU2Hr1G064920.1 | AT2G39760.1 | 15618422 |
| AT5G21010.1 | HORVU2Hr1G064920.1 | AT2G39760.1 | 15618422 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 90.2 | 97.18 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 89.76 | 96.71 |
| TraesCS2B01G262200.1 | Wheat | cytosol | 89.76 | 96.71 |
| KXG25976 | Sorghum | cytosol | 24.84 | 94.21 |
| Os07t0167200-01 | Rice | cytosol | 83.01 | 89.86 |
| KXG34465 | Sorghum | cytosol | 81.92 | 85.26 |
| Zm00001d018887_P002 | Maize | cytosol | 79.08 | 84.03 |
| HORVU5Hr1G104190.1 | Barley | cytosol | 73.64 | 83.66 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 65.8 | 76.84 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 66.88 | 76.37 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 64.92 | 75.83 |
| PGSC0003DMT400058456 | Potato | cytosol | 66.23 | 75.06 |
| Solyc01g009060.2.1 | Tomato | cytosol | 65.8 | 74.57 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 67.54 | 73.29 |
| PGSC0003DMT400070468 | Potato | cytosol | 65.14 | 73.28 |
| Solyc11g072070.1.1 | Tomato | cytosol | 65.14 | 73.28 |
| KRH73429 | Soybean | cytosol, plastid | 63.18 | 73.23 |
| KRH14738 | Soybean | cytosol | 62.96 | 72.98 |
| VIT_08s0056g01670.t01 | Wine grape | plastid | 65.36 | 69.61 |
| KRG94896 | Soybean | mitochondrion | 62.96 | 66.9 |
| CDX88828 | Canola | plastid | 59.7 | 66.83 |
| Bra006591.1-P | Field mustard | plastid | 59.7 | 66.83 |
| CDX70957 | Canola | plastid | 59.48 | 66.59 |
| KRH06640 | Soybean | mitochondrion, plastid | 62.75 | 66.36 |
| AT5G21010.1 | Thale cress | cytosol | 59.04 | 66.1 |
| Bra036437.1-P | Field mustard | plastid | 62.31 | 64.13 |
| CDY29955 | Canola | plastid | 62.09 | 63.47 |
| Bra020142.1-P | Field mustard | plastid | 57.3 | 63.37 |
| KRG94057 | Soybean | mitochondrion | 25.05 | 62.84 |
| CDY09093 | Canola | cytosol, plastid | 50.11 | 62.67 |
| AT3G43700.1 | Thale cress | plastid | 56.64 | 62.65 |
| KRG88614 | Soybean | mitochondrion | 42.48 | 62.5 |
| KRG88616 | Soybean | cytosol | 31.37 | 61.54 |
| AT3G03740.1 | Thale cress | cytosol | 62.31 | 61.51 |
| KRG94050 | Soybean | mitochondrion | 50.11 | 60.85 |
| KRG94069 | Soybean | cytosol | 47.28 | 60.78 |
| KRG88615 | Soybean | mitochondrion | 49.67 | 60.32 |
| KRG94064 | Soybean | mitochondrion | 49.46 | 60.05 |
| KRG94056 | Soybean | cytosol | 10.24 | 59.49 |
| KRG94047 | Soybean | cytosol, mitochondrion, plastid | 37.47 | 59.11 |
| HORVU2Hr1G023850.1 | Barley | cytosol, plastid | 50.33 | 58.93 |
| KRH06645 | Soybean | cytosol | 50.76 | 58.84 |
| CDY71585 | Canola | cytosol | 25.71 | 58.42 |
| KRG94052 | Soybean | cytosol | 22.88 | 56.15 |
| KRG94053 | Soybean | cytosol | 22.88 | 56.15 |
| KRG94058 | Soybean | mitochondrion | 45.97 | 56.12 |
| CDY16586 | Canola | cytosol | 20.91 | 55.17 |
| CDY67137 | Canola | endoplasmic reticulum | 42.05 | 54.21 |
| KRH06646 | Soybean | cytosol | 32.46 | 48.85 |
| HORVU2Hr1G064920.1 | Barley | plastid | 45.53 | 48.6 |
| HORVU1Hr1G020270.1 | Barley | mitochondrion, plastid | 30.94 | 40.69 |
| HORVU5Hr1G108760.1 | Barley | cytosol | 29.41 | 39.59 |
| HORVU5Hr1G009850.1 | Barley | cytosol | 30.07 | 39.43 |
| HORVU0Hr1G010120.1 | Barley | plastid | 30.07 | 39.09 |
| HORVU5Hr1G089030.1 | Barley | cytosol | 29.63 | 38.31 |
| HORVU3Hr1G084920.2 | Barley | cytosol | 22.0 | 38.11 |
| HORVU2Hr1G112920.1 | Barley | cytosol | 28.98 | 37.89 |
| HORVU5Hr1G110530.1 | Barley | cytosol | 19.61 | 36.29 |
| HORVU7Hr1G114550.1 | Barley | cytosol, plastid | 28.98 | 35.75 |
| HORVU5Hr1G108800.1 | Barley | cytosol | 26.36 | 35.48 |
| HORVU2Hr1G106560.1 | Barley | plastid | 27.45 | 35.29 |
| HORVU7Hr1G074430.1 | Barley | cytosol | 27.23 | 35.01 |
| HORVU7Hr1G074420.1 | Barley | cytosol | 22.0 | 34.71 |
| HORVU2Hr1G106750.2 | Barley | plastid | 31.15 | 30.17 |
| HORVU5Hr1G009860.1 | Barley | cytosol, peroxisome | 28.98 | 30.16 |
| HORVU6Hr1G034020.1 | Barley | plastid | 16.78 | 30.08 |
| HORVU6Hr1G069480.1 | Barley | plastid | 30.72 | 29.68 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A287I1P5 | InterPro:BPM_C |
| InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU2Hr1G055140 | EnsemblPlants:HORVU2Hr1G055140.1 |
| InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 |
| PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 |
| SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI000B46A07C | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:+:341749579..341761271
Molecular Weight (calculated)
50045.6 Da
IEP (calculated)
5.198
GRAVY (calculated)
-0.292
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: HSQNQTKHPY AQSAENFPIL ASTVTLTLAN PIPMDDDAGD ASPPPGPAPP AATGAPSSRD MAASPTSSRS VTETVNGSHR FVIQGYSLAK GMGVGKHIAS
101: ETFTVGGYQW AIYFYPDGKN PEDNSAYVSV FIALASEGTD VRALFELTLQ DQSGKGKHKI HSHFDRSLES GPYTLKYRGS MWGYKRFFRR TALETSDFLK
201: DDCLKINCTV GVVVSTIDYS RSHSIQVPDS DIGYHFGSLL DSNEGVDVIL NVSGERFHAH KLVLAARSTV FRSKLFDDES EGEKNEVNES EDLEEIVIDD
301: MEPKVFKAML HFIYRDTLVN DYELDASSSM GSIFDTLAAK LLAAADKYDL GRLRLLCESY LCKDISVASV ASTLALADSH HAMELKAVCL KFAAENLSAV
401: IRTDGFDYLK DTCPSLQSEI LRTVAGCEEP CSSGGKSQSV WGQLSDGGDT SGRRVRPRI
101: ETFTVGGYQW AIYFYPDGKN PEDNSAYVSV FIALASEGTD VRALFELTLQ DQSGKGKHKI HSHFDRSLES GPYTLKYRGS MWGYKRFFRR TALETSDFLK
201: DDCLKINCTV GVVVSTIDYS RSHSIQVPDS DIGYHFGSLL DSNEGVDVIL NVSGERFHAH KLVLAARSTV FRSKLFDDES EGEKNEVNES EDLEEIVIDD
301: MEPKVFKAML HFIYRDTLVN DYELDASSSM GSIFDTLAAK LLAAADKYDL GRLRLLCESY LCKDISVASV ASTLALADSH HAMELKAVCL KFAAENLSAV
401: IRTDGFDYLK DTCPSLQSEI LRTVAGCEEP CSSGGKSQSV WGQLSDGGDT SGRRVRPRI
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.