Factsheet for HORVU1Hr1G020270.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	86.25	86.49
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	85.96	86.21
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	83.38	83.62
HORVU0Hr1G010120.1	Barley	plastid	53.58	52.97
HORVU5Hr1G009850.1	Barley	cytosol	52.15	52.0
HORVU2Hr1G112920.1	Barley	cytosol	52.15	51.85
HORVU7Hr1G114550.1	Barley	cytosol, plastid	52.44	49.19
HORVU5Hr1G108760.1	Barley	cytosol	47.28	48.39
HORVU5Hr1G110530.1	Barley	cytosol	32.38	45.56
HORVU5Hr1G108800.1	Barley	cytosol	42.12	43.11
HORVU5Hr1G009860.1	Barley	cytosol, peroxisome	54.15	42.86
HORVU7Hr1G074430.1	Barley	cytosol	41.26	40.34
HORVU2Hr1G023850.1	Barley	cytosol, plastid	44.99	40.05
HORVU3Hr1G084920.2	Barley	cytosol	30.37	40.0
HORVU7Hr1G074420.1	Barley	cytosol	33.24	39.86
HORVU6Hr1G034020.1	Barley	plastid	28.65	39.06
HORVU6Hr1G069480.1	Barley	plastid	51.86	38.11
HORVU2Hr1G106560.1	Barley	plastid	37.82	36.97
HORVU5Hr1G089030.1	Barley	cytosol	36.1	35.49
HORVU5Hr1G104190.1	Barley	cytosol	40.11	34.65
HORVU2Hr1G064920.1	Barley	plastid	39.83	32.33
HORVU2Hr1G055140.1	Barley	cytosol	40.69	30.94
HORVU2Hr1G106750.2	Barley	plastid	39.54	29.11

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287EU66	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU1Hr1G020270	EnsemblPlants:HORVU1Hr1G020270.1
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B468C21	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:78980344..78982485

Molecular Weight (calculated)

38519.2 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.068

Length

349 amino acids

Sequence
(BLAST)

001: MRTASTCAAS AVRGTHTFKI AGYSLHRGLG VGKSIPSAAF DIGGYLWRIL YYPDGEMEME MENGGDHASV FLALVSEDAE VRASFEVRLV DQTNKLSPSV
101: LLSQNTPITF HNNEQRGSMG GDFLQPSAYL LDDSLVIECD VTVLTESKVT LTAFDIQVPP SDLGEHLRVL LEKGEGADIV FEVEGEVFPA HKIVVAGRSP
201: VFKAQLFGPM SDEAKQRIVV EDMQPAVFKA LLRFIYTDSL PSMENLDGDE GKEMFKHLLV AADRYAMERM KVMCESILCK SLDVENVTAT LALADQHHCS
301: NLKDACLEFI TSPDRMDDVM ASQGYAHLKR SCPAVVIDVF ERAKRSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.