Factsheet for TraesCS1D01G093200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G111900.1	Wheat	mitochondrion, plastid	90.52	90.52
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	89.66	89.66
HORVU1Hr1G020270.1	Barley	mitochondrion, plastid	86.49	86.25
TraesCS5D01G047900.1	Wheat	cytosol	27.01	67.14
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	64.94	64.94
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	26.15	58.71
TraesCS2D01G059700.1	Wheat	cytosol	22.41	57.35
TraesCS2D01G363000.1	Wheat	mitochondrion	59.48	56.56
TraesCS5D01G048000.1	Wheat	cytosol	54.02	54.81
TraesCS3D01G352200.1	Wheat	cytosol	45.69	53.9
TraesCS3D01G026900.1	Wheat	cytosol	55.75	53.44
TraesCS2D01G544500.1	Wheat	cytosol, plastid	45.4	53.2
TraesCS2D01G458900.1	Wheat	extracellular	22.13	52.03
TraesCS2D01G363600.1	Wheat	cytosol	54.02	51.93
TraesCS7D01G024000.1	Wheat	mitochondrion	52.87	51.54
TraesCS5D01G048300.1	Wheat	plastid	52.01	51.27
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	50.29	50.43
TraesCS7D01G500400.1	Wheat	cytosol	51.15	48.5
TraesCS7D01G501200.1	Wheat	cytosol	51.44	48.25
TraesCS2D01G544700.1	Wheat	cytosol	44.83	48.0
TraesCS5D01G462100.1	Wheat	cytosol	48.85	47.49
TraesCS3D01G177000.1	Wheat	cytosol	46.55	47.09
TraesCS5D01G461700.1	Wheat	cytosol	48.28	46.28
TraesCS6D01G256000.1	Wheat	cytosol	51.15	46.23
TraesCS2D01G544900.1	Wheat	plastid	36.78	45.71
TraesCS2D01G415300.1	Wheat	cytosol	48.56	45.68
TraesCS2D01G059500.1	Wheat	cytosol	46.26	44.97
TraesCS3D01G026500.1	Wheat	mitochondrion	49.71	44.94
TraesCS7D01G148800.1	Wheat	cytosol	45.4	44.38
TraesCS5D01G047800.1	Wheat	peroxisome	47.7	44.27
TraesCS3D01G310900.1	Wheat	cytosol	35.63	43.51
TraesCS7D01G501100.1	Wheat	plastid	35.06	41.92
TraesCS7D01G308000.1	Wheat	cytosol	41.95	40.9
TraesCS7D01G537000.1	Wheat	cytosol	32.47	40.07
TraesCS7D01G307900.1	Wheat	cytosol, plastid	41.95	39.89
TraesCS2D01G472200.1	Wheat	cytosol	38.79	39.71
TraesCS3D01G214900.1	Wheat	cytosol	28.16	39.36
TraesCS5D01G474700.1	Wheat	cytosol	25.86	38.63
TraesCS2D01G472400.1	Wheat	cytosol	40.23	38.46
TraesCS6D01G156500.1	Wheat	plastid	36.21	37.72
TraesCS3D01G513100.1	Wheat	cytosol, plastid	37.64	37.11
TraesCS7D01G307800.1	Wheat	cytosol	33.91	36.76
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.0	36.71
TraesCS4D01G353300.1	Wheat	cytosol	37.64	36.59
TraesCS2D01G469800.1	Wheat	plastid	37.07	36.13
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	43.97	36.0
TraesCS2D01G266900.1	Wheat	cytosol	40.8	35.86
TraesCS5D01G370700.1	Wheat	cytosol	27.87	34.89
TraesCS2D01G472300.1	Wheat	cytosol	37.07	34.22
TraesCS2D01G470700.1	Wheat	cytosol	35.34	34.07
TraesCS2D01G246900.1	Wheat	cytosol, plastid	41.09	33.57
TraesCS4D01G197600.1	Wheat	cytosol	32.76	32.48
TraesCS2D01G471800.1	Wheat	cytosol	36.21	30.51
TraesCS5D01G437400.1	Wheat	cytosol	39.66	29.93
TraesCS2D01G471700.1	Wheat	cytosol	31.03	25.96

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS1D01G093200
EnsemblPlants:TraesCS1D01G093200.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:79115805..79116851

Molecular Weight (calculated)

38851.6 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.150

Length

348 amino acids

Sequence
(BLAST)

001: MRTASMCTAS TVRGTHTFKI AGYSLHKGLG VGNFIPSATF DIGGYLWRVL YYPDGEMEME NGDHASVFLD LVSEDTEARA FFEVRLVDKT NKLPPSVVLS
101: QKTPYVFNSN GRRSSVGDDF LQPSAYLLDD SLVLECDVTV LRESKVTLTA TTFDIQVPPS DLGEHFRELL EKEEEADVVF EVEGEVFPAH KIVVAGRSPV
201: FKAQLFGPMS DRAKQRITVE DMQPAVFKAL LHFIYTDSLP SMEKLDGDEG KEMVKHLLVA ADRYAMERMK VMCESILCKS LDVENVTATL ALADQHHCSN
301: LRDACLEFIT STDRMDDVMA SQGYAHLKRS CPSIVIDVLE KAKKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.