Factsheet for TraesCS1D01G374400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G368600.1	Wheat	mitochondrion	88.51	88.51
TraesCS1B01G387500.1	Wheat	cytosol, plastid	90.23	86.03
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	64.94	64.94
TraesCS5D01G047900.1	Wheat	cytosol	24.43	60.71
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	25.0	56.13
TraesCS2D01G059700.1	Wheat	cytosol	20.69	52.94
TraesCS3D01G352200.1	Wheat	cytosol	43.68	51.53
TraesCS7D01G024000.1	Wheat	mitochondrion	52.01	50.7
TraesCS5D01G048000.1	Wheat	cytosol	49.71	50.44
TraesCS2D01G363000.1	Wheat	mitochondrion	52.01	49.45
TraesCS5D01G048300.1	Wheat	plastid	49.14	48.44
TraesCS2D01G458900.1	Wheat	extracellular	20.4	47.97
TraesCS2D01G363600.1	Wheat	cytosol	49.71	47.79
TraesCS3D01G026900.1	Wheat	cytosol	49.71	47.66
TraesCS2D01G544500.1	Wheat	cytosol, plastid	40.23	47.14
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	46.84	46.97
TraesCS7D01G500400.1	Wheat	cytosol	47.7	45.23
TraesCS2D01G544700.1	Wheat	cytosol	42.24	45.23
TraesCS3D01G177000.1	Wheat	cytosol	43.97	44.48
TraesCS5D01G461700.1	Wheat	cytosol	45.69	43.8
TraesCS2D01G059500.1	Wheat	cytosol	44.83	43.58
TraesCS7D01G501200.1	Wheat	cytosol	46.26	43.4
TraesCS5D01G462100.1	Wheat	cytosol	44.54	43.3
TraesCS6D01G256000.1	Wheat	cytosol	47.13	42.6
TraesCS7D01G148800.1	Wheat	cytosol	43.39	42.42
TraesCS2D01G415300.1	Wheat	cytosol	44.54	41.89
TraesCS3D01G026500.1	Wheat	mitochondrion	45.98	41.56
TraesCS3D01G310900.1	Wheat	cytosol	33.05	40.35
TraesCS5D01G047800.1	Wheat	peroxisome	43.39	40.27
TraesCS2D01G544900.1	Wheat	plastid	31.32	38.93
TraesCS7D01G501100.1	Wheat	plastid	32.18	38.49
TraesCS7D01G537000.1	Wheat	cytosol	31.03	38.3
TraesCS3D01G214900.1	Wheat	cytosol	27.3	38.15
TraesCS7D01G308000.1	Wheat	cytosol	38.79	37.82
TraesCS6D01G156500.1	Wheat	plastid	36.21	37.72
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.57	37.55
TraesCS5D01G474700.1	Wheat	cytosol	24.71	36.91
TraesCS7D01G307900.1	Wheat	cytosol, plastid	37.93	36.07
TraesCS2D01G472200.1	Wheat	cytosol	35.06	35.88
TraesCS3D01G513100.1	Wheat	cytosol, plastid	35.92	35.41
TraesCS2D01G472400.1	Wheat	cytosol	36.49	34.89
TraesCS2D01G469800.1	Wheat	plastid	35.63	34.73
TraesCS4D01G353300.1	Wheat	cytosol	35.63	34.64
TraesCS5D01G370700.1	Wheat	cytosol	27.59	34.53
TraesCS2D01G472300.1	Wheat	cytosol	37.36	34.48
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	41.09	33.65
TraesCS4D01G197600.1	Wheat	cytosol	32.76	32.48
TraesCS2D01G470700.1	Wheat	cytosol	33.62	32.41
TraesCS2D01G266900.1	Wheat	cytosol	36.49	32.07
TraesCS7D01G307800.1	Wheat	cytosol	29.31	31.78
TraesCS2D01G246900.1	Wheat	cytosol, plastid	35.92	29.34
TraesCS2D01G471800.1	Wheat	cytosol	34.48	29.06
TraesCS5D01G437400.1	Wheat	cytosol	35.92	27.11
TraesCS2D01G471700.1	Wheat	cytosol	29.89	25.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS1D01G374400
EnsemblPlants:TraesCS1D01G374400.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr1D:-:451940124..451941170

Molecular Weight (calculated)

38794.8 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.050

Length

348 amino acids

Sequence
(BLAST)

001: MRALASLCTP SVVQGTHTFK IAGYSLQRGL GVGRYLSSAA FDVGGYLWRI EYYPDGEMEM KIGDYASISL DFVSTNSEVR ASFEVRLVDQ ANKLPPLVLL
101: SQKMPIVFRS HPPPYVGKDF LQPSLYLQDD NLVIECSITV LAESKVAVTA TSVDIQVPPS DLSNNLGELL KAGEETDVTF EVRGESFHAH KNVLAMRSPV
201: FKAVLFGPMG DKTRWTMNIE GIQPAIFSAL LHFIYTDSLP SMGHLYGDDG EEMVKHLVVA ADRYAMERMK VICESILCKN LNVQNVTTTL ALADRYHCNQ
301: LKNACLEFIT SPNRVQDVVE SEEYAKLKRS RPAIIVDIFE RATKSRKI

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.