Factsheet for TraesCS5D01G048000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G047900.1	Wheat	cytosol	36.44	89.29
TraesCS5A01G040900.1	Wheat	cytosol	57.43	87.56
TraesCS5B01G042300.1	Wheat	plastid	81.92	80.06
HORVU0Hr1G010120.1	Barley	plastid	79.3	77.05
TraesCS5D01G048300.1	Wheat	plastid	76.97	74.79
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	72.3	71.47
TraesCS5D01G047800.1	Wheat	peroxisome	67.93	62.13
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	25.95	57.42
TraesCS3D01G352200.1	Wheat	cytosol	48.98	56.95
TraesCS2D01G363000.1	Wheat	mitochondrion	59.48	55.74
TraesCS3D01G026900.1	Wheat	cytosol	57.73	54.55
TraesCS7D01G024000.1	Wheat	mitochondrion	56.27	54.06
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	54.81	54.02
TraesCS2D01G059700.1	Wheat	cytosol	20.99	52.94
TraesCS2D01G363600.1	Wheat	cytosol	55.1	52.21
TraesCS2D01G544500.1	Wheat	cytosol, plastid	44.31	51.18
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	50.44	49.71
TraesCS2D01G458900.1	Wheat	extracellular	21.28	49.32
TraesCS7D01G500400.1	Wheat	cytosol	52.19	48.77
TraesCS7D01G501200.1	Wheat	cytosol	51.31	47.44
TraesCS7D01G148800.1	Wheat	cytosol	48.98	47.19
TraesCS3D01G026500.1	Wheat	mitochondrion	51.6	45.97
TraesCS2D01G544700.1	Wheat	cytosol	43.44	45.85
TraesCS5D01G462100.1	Wheat	cytosol	47.23	45.25
TraesCS6D01G256000.1	Wheat	cytosol	49.85	44.42
TraesCS2D01G059500.1	Wheat	cytosol	45.19	43.3
TraesCS2D01G544900.1	Wheat	plastid	34.99	42.86
TraesCS3D01G177000.1	Wheat	cytosol	42.86	42.73
TraesCS2D01G415300.1	Wheat	cytosol	45.19	41.89
TraesCS5D01G461700.1	Wheat	cytosol	44.31	41.87
TraesCS7D01G501100.1	Wheat	plastid	33.82	39.86
TraesCS3D01G310900.1	Wheat	cytosol	32.94	39.65
TraesCS7D01G537000.1	Wheat	cytosol	31.49	38.3
TraesCS7D01G307900.1	Wheat	cytosol, plastid	40.23	37.7
TraesCS7D01G308000.1	Wheat	cytosol	38.78	37.25
TraesCS6D01G156500.1	Wheat	plastid	35.86	36.83
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	25.07	36.29
TraesCS5D01G474700.1	Wheat	cytosol	24.49	36.05
TraesCS2D01G472200.1	Wheat	cytosol	35.57	35.88
TraesCS3D01G214900.1	Wheat	cytosol	25.95	35.74
TraesCS2D01G472400.1	Wheat	cytosol	37.03	34.89
TraesCS3D01G513100.1	Wheat	cytosol, plastid	35.86	34.84
TraesCS4D01G353300.1	Wheat	cytosol	35.57	34.08
TraesCS2D01G469800.1	Wheat	plastid	34.99	33.61
TraesCS2D01G472300.1	Wheat	cytosol	36.44	33.16
TraesCS7D01G307800.1	Wheat	cytosol	30.9	33.02
TraesCS2D01G470700.1	Wheat	cytosol	34.69	32.96
TraesCS4D01G197600.1	Wheat	cytosol	33.53	32.76
TraesCS5D01G370700.1	Wheat	cytosol	26.24	32.37
TraesCS2D01G266900.1	Wheat	cytosol	36.44	31.57
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	38.48	31.06
TraesCS2D01G246900.1	Wheat	cytosol, plastid	37.03	29.81
TraesCS2D01G471800.1	Wheat	cytosol	34.4	28.57
TraesCS5D01G437400.1	Wheat	cytosol	37.9	28.2
TraesCS2D01G471700.1	Wheat	cytosol	28.57	23.56

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379
PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS5D01G048000	EnsemblPlants:TraesCS5D01G048000.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr5D:+:45938693..45939941

Molecular Weight (calculated)

38667.8 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.118

Length

343 amino acids

Sequence
(BLAST)

001: MASIARVPSR CTAETARATV AFEIAGYSRH KGLFRGKFLR SPAFSIGGYE WCVRYYPDAE ESEGHVSVYL ELLTKNAEVR ALCSFMLVDP VKEKSIVVHS
101: FKEPRVFNGK WPSWGLLKFM KSTPEVESLY LRNDCLVIEC EVSVIKETLE IHVPPSDLSD NLAKLLEGKG ADLTFKVRGE VFSAHKILLA TRSAVFDAEY
201: YGPMGDKGTH EITIDDMQPA VFKAFLHFIY TDSMPSMDDL EADDKREMVK HVLVAADKYA MERMKMVCEH MLCKSLDVEN VATILALADQ HNCRNLKDAC
301: IEFMLSSNRM NDVIASQGYV QLKRSSPDII VDVLERAAKS RKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.