Factsheet for TraesCS2D01G544700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G573600.1	Wheat	cytosol	94.77	94.19
TraesCS2D01G544500.1	Wheat	cytosol, plastid	67.38	73.74
TraesCS2D01G544900.1	Wheat	plastid	58.15	67.5
TraesCS2D01G363000.1	Wheat	mitochondrion	54.46	48.36
TraesCS3D01G026900.1	Wheat	cytosol	52.62	47.11
TraesCS7D01G024000.1	Wheat	mitochondrion	50.46	45.94
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	48.0	44.96
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	48.0	44.83
TraesCS5D01G462100.1	Wheat	cytosol	48.92	44.41
TraesCS2D01G363600.1	Wheat	cytosol	48.92	43.92
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	20.92	43.87
TraesCS5D01G048000.1	Wheat	cytosol	45.85	43.44
TraesCS3D01G310900.1	Wheat	cytosol	37.85	43.16
TraesCS7D01G501100.1	Wheat	plastid	38.46	42.96
TraesCS7D01G501200.1	Wheat	cytosol	48.92	42.86
TraesCS5D01G048300.1	Wheat	plastid	46.46	42.78
TraesCS3D01G177000.1	Wheat	cytosol	44.92	42.44
TraesCS5D01G461700.1	Wheat	cytosol	47.38	42.42
TraesCS3D01G352200.1	Wheat	cytosol	38.46	42.37
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	45.23	42.24
TraesCS7D01G500400.1	Wheat	cytosol	47.69	42.23
TraesCS6D01G156500.1	Wheat	plastid	43.38	42.22
TraesCS2D01G059700.1	Wheat	cytosol	17.54	41.91
TraesCS5D01G474700.1	Wheat	cytosol	29.85	41.63
TraesCS2D01G059500.1	Wheat	cytosol	45.85	41.62
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	29.85	40.93
TraesCS2D01G415300.1	Wheat	cytosol	44.92	39.46
TraesCS5D01G047900.1	Wheat	cytosol	16.92	39.29
TraesCS3D01G214900.1	Wheat	cytosol	29.85	38.96
TraesCS7D01G148800.1	Wheat	cytosol	42.15	38.48
TraesCS6D01G256000.1	Wheat	cytosol	45.54	38.44
TraesCS3D01G026500.1	Wheat	mitochondrion	44.31	37.4
TraesCS7D01G308000.1	Wheat	cytosol	40.92	37.25
TraesCS7D01G537000.1	Wheat	cytosol	32.0	36.88
TraesCS2D01G472200.1	Wheat	cytosol	38.46	36.76
TraesCS5D01G370700.1	Wheat	cytosol	31.38	36.69
TraesCS5D01G047800.1	Wheat	peroxisome	42.15	36.53
TraesCS2D01G458900.1	Wheat	extracellular	16.62	36.49
TraesCS7D01G307900.1	Wheat	cytosol, plastid	39.08	34.7
TraesCS7D01G307800.1	Wheat	cytosol	34.15	34.58
TraesCS3D01G513100.1	Wheat	cytosol, plastid	37.54	34.56
TraesCS4D01G353300.1	Wheat	cytosol	37.23	33.8
TraesCS4D01G197600.1	Wheat	cytosol	35.69	33.05
TraesCS2D01G472400.1	Wheat	cytosol	36.92	32.97
TraesCS2D01G472300.1	Wheat	cytosol	37.54	32.36
TraesCS2D01G469800.1	Wheat	plastid	34.46	31.37
TraesCS2D01G470700.1	Wheat	cytosol	34.46	31.02
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	39.69	30.35
TraesCS2D01G266900.1	Wheat	cytosol	36.62	30.05
TraesCS2D01G246900.1	Wheat	cytosol, plastid	38.15	29.11
TraesCS2D01G471800.1	Wheat	cytosol	36.62	28.81
TraesCS5D01G437400.1	Wheat	cytosol	36.62	25.81
TraesCS2D01G471700.1	Wheat	cytosol	32.92	25.72

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2D01G544700	EnsemblPlants:TraesCS2D01G544700.1
TIGR:cd00121	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:621608289..621610327

Molecular Weight (calculated)

36044.9 Da

IEP (calculated)

8.253

GRAVY (calculated)

-0.019

Length

325 amino acids

Sequence
(BLAST)

001: MAAPQTATAS ACIPETAWGT HVFTVAGYRL HKGLGAGNFI RSATFAVGGY DWCIRYYPDG YSADTKDYVS VCVELQSRKS VVRALYNLSL TNQATGMPSL
101: IFSRPRSLPA FNSRKKDKDM HVKGASWFMK TELLEASPYL QDDCIVIHCD MTVVLRDIPA VAMATTKAPE IQLPPSDLSN NLAKLLEGKK GADVSIKVSG
201: QTFYAHKLVL AMRSPVFDAD LNGPMWDNEK QCIHIEDMQP AVFRALLHFV YTDSLPAAMD ENKEMMRHLL VAADRYAMGR MKLMCEIILC KTLDAKSVVA
301: TLALVDQHGC SKLKKACIEY IKIFN

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.