Factsheet for TraesCS2D01G472300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G513100.1	Wheat	cytosol, plastid	57.03	60.91
TraesCS2D01G472200.1	Wheat	cytosol	51.72	57.35
TraesCS4D01G353300.1	Wheat	cytosol	54.38	57.26
TraesCS5D01G370700.1	Wheat	cytosol	40.85	55.4
OQU82373	Sorghum	cytosol, plastid	46.68	51.92
OQU82372	Sorghum	plastid	45.89	50.73
TraesCS2D01G470700.1	Wheat	cytosol	47.75	49.86
Os04t0625500-00	Rice	plastid	49.34	49.6
TraesCS2D01G472400.1	Wheat	cytosol	47.48	49.18
TraesCS2D01G469800.1	Wheat	plastid	45.36	47.9
Os04t0625400-00	Rice	plastid	41.64	47.58
TraesCS2D01G471800.1	Wheat	cytosol	50.66	46.25
TraesCS2D01G471700.1	Wheat	cytosol	48.81	44.23
TraesCS2D01G059700.1	Wheat	cytosol	15.92	44.12
TraesCS5D01G047900.1	Wheat	cytosol	15.92	42.86
EES11459	Sorghum	plastid	41.91	41.47
TraesCS7D01G500500.1	Wheat	cytosol, nucleus, plastid	16.98	41.29
TraesCS2D01G508700.1	Wheat	cytosol, mitochondrion, plastid	37.14	40.35
TraesCS7D01G024000.1	Wheat	mitochondrion	37.14	39.22
TraesCS2D01G363000.1	Wheat	mitochondrion	37.93	39.07
TraesCS3D01G352200.1	Wheat	cytosol	30.5	38.98
TraesCS2D01G458900.1	Wheat	extracellular	15.12	38.51
TraesCS2D01G544500.1	Wheat	cytosol, plastid	29.71	37.71
TraesCS5D01G462100.1	Wheat	cytosol	35.81	37.71
TraesCS4D01G197600.1	Wheat	cytosol	35.01	37.61
TraesCS2D01G544700.1	Wheat	cytosol	32.36	37.54
TraesCS5D01G461700.1	Wheat	cytosol	36.07	37.47
TraesCS3D01G026900.1	Wheat	cytosol	36.07	37.47
TraesCS2D01G059500.1	Wheat	cytosol	35.54	37.43
TraesCS1D01G374400.1	Wheat	mitochondrion, plastid	34.48	37.36
TraesCS1D01G093200.1	Wheat	mitochondrion, plastid	34.22	37.07
TraesCS7D01G501200.1	Wheat	cytosol	36.34	36.93
TraesCS5D01G048300.1	Wheat	plastid	34.48	36.83
TraesCS7D01G148800.1	Wheat	cytosol	34.48	36.52
TraesCS5D01G048000.1	Wheat	cytosol	33.16	36.44
TraesCS3D01G177000.1	Wheat	cytosol	33.16	36.34
TraesCS7D01G500400.1	Wheat	cytosol	35.01	35.97
TraesCS2D01G363600.1	Wheat	cytosol	34.22	35.64
TraesCS7D01G308000.1	Wheat	cytosol	33.16	35.01
TraesCS6D01G256000.1	Wheat	cytosol	35.54	34.81
TraesCS6D01G156500.1	Wheat	plastid	30.5	34.43
TraesCS5D01G047800.1	Wheat	peroxisome	33.95	34.13
TraesCS7D01G537000.1	Wheat	cytosol	25.46	34.04
TraesCS2D01G544900.1	Wheat	plastid	25.2	33.93
TraesCS7D01G501100.1	Wheat	plastid	25.99	33.68
TraesCS2D01G266900.1	Wheat	cytosol	35.28	33.59
TraesCS2D01G415300.1	Wheat	cytosol	32.89	33.51
TraesCS2D01G138300.1	Wheat	mitochondrion, plastid	36.87	32.71
TraesCS3D01G310900.1	Wheat	cytosol	24.4	32.28
TraesCS7D01G307900.1	Wheat	cytosol, plastid	31.3	32.24
TraesCS5D01G474700.1	Wheat	cytosol	19.63	31.76
TraesCS3D01G214900.1	Wheat	cytosol	20.95	31.73
TraesCS7D01G307800.1	Wheat	cytosol	26.53	31.15
TraesCS3D01G026500.1	Wheat	mitochondrion	31.57	30.91
TraesCS2D01G246900.1	Wheat	cytosol, plastid	34.48	30.52
TraesCS2D01G415400.1	Wheat	cytosol, mitochondrion	17.77	28.27
TraesCS5D01G437400.1	Wheat	cytosol	34.22	27.98

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS2D01G472300	EnsemblPlants:TraesCS2D01G472300.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:575945080..575946213

Molecular Weight (calculated)

41716.8 Da

IEP (calculated)

7.410

GRAVY (calculated)

-0.248

Length

377 amino acids

Sequence
(BLAST)

001: MGNRFCCSSV RRQYPPKKEG SPPPPAETWS RCSTESVTAT HNFEVTGFSS LEGIGAGKFL RSGKFTVGGC EWDLHLYPDG WKEEHKSVYA SVFLSLCEGE
101: TGTSGVTTKY TLTLLDQHGR VSNLTTQGSQ GSLQHTFHST TGYWGFEKFV EKPKLRQLLA LTGDSFTVRC VLTVIKKGQA EDVHTAVAPL PQSNLHKHFL
201: DMLKGGEGAD VTFTVAGQSF LAHRCVLAAR SPLFKAELFG KMNETLAQSI KIDGMEPSIF EALLHFIYTD SLSDDRHADD RHTEMQHLLV AADRYGVDRL
301: MAICEGKLCR SIGVQTVATT LALAEQHHCM HLKRACLEFL SSRDVRQAVK ETYGFKHLVT SCPSVILEIF DKPPPQS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.