CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G528500.1	Wheat	cytosol	41.47	49.84
TraesCS4A01G465700.1	Wheat	cytosol	45.41	48.32
TraesCS5A01G528600.1	Wheat	cytosol	44.88	48.03
TraesCS5A01G554900.1	Wheat	cytosol	44.88	47.63
TraesCSU01G034400.1	Wheat	cytosol	44.88	47.5
TraesCS3D01G513100.1	Wheat	cytosol, plastid	43.83	47.31
OQU82372	Sorghum	plastid	42.26	47.21
TraesCS4D01G353300.1	Wheat	cytosol	44.36	47.21
TraesCS4B01G360000.1	Wheat	cytosol	44.09	46.93
TraesCS4B01G360400.1	Wheat	cytosol	43.57	46.76
TraesCS4A01G465200.1	Wheat	cytosol	40.94	46.29
TraesCS4B01G392200.1	Wheat	cytosol	43.57	46.24
HORVU5Hr1G089030.1	Barley	cytosol	42.78	45.92
TraesCS2A01G472600.1	Wheat	cytosol	40.42	45.29
OQU82373	Sorghum	cytosol, plastid	40.16	45.13
TraesCS5B01G364400.1	Wheat	plastid	43.04	44.81
TraesCS2D01G472200.1	Wheat	cytosol	39.63	44.41
TraesCS5D01G370700.1	Wheat	cytosol	32.02	43.88
TraesCS5A01G361900.1	Wheat	cytosol	40.16	42.62
TraesCS2D01G472300.1	Wheat	cytosol	41.47	41.91
Os04t0625400-00	Rice	plastid	35.96	41.52
Os04t0625500-00	Rice	plastid	40.68	41.33
KXG27151	Sorghum	plastid	41.73	41.19
EES11455	Sorghum	cytosol	34.65	40.74
TraesCS2B01G494600.1	Wheat	cytosol	39.11	40.38
OQU80118	Sorghum	cytosol	12.6	39.34
KXG24752	Sorghum	cytosol	16.54	38.18
EES14743	Sorghum	cytosol, mitochondrion, plastid	35.96	38.06
OQU80115	Sorghum	cytosol	34.12	37.14
KXG24742	Sorghum	mitochondrion	34.65	36.57
TraesCS2D01G471700.1	Wheat	cytosol	38.85	35.58
TraesCS2A01G471700.1	Wheat	cytosol	39.11	35.56
EES14728	Sorghum	cytosol	32.81	35.31
TraesCS2D01G471800.1	Wheat	cytosol	38.06	35.11
TraesCSU01G020200.1	Wheat	cytosol	39.37	35.05
OQU80150	Sorghum	plastid	31.76	34.67
EES08963	Sorghum	cytosol	33.86	33.95
EES14737	Sorghum	cytosol	31.5	33.8
EER97813	Sorghum	plastid	34.91	33.08
EER87831	Sorghum	cytosol	30.45	32.77
TraesCS2A01G471800.1	Wheat	mitochondrion	38.85	32.74
EES14736	Sorghum	cytosol	30.45	32.68
EER99574	Sorghum	cytosol	30.97	32.33
EES13596	Sorghum	mitochondrion	29.4	32.28
OQU80119	Sorghum	cytosol	31.5	31.66
KXG24756	Sorghum	cytosol	29.13	31.27
KXG24755	Sorghum	mitochondrion	30.71	31.12
EES13585	Sorghum	cytosol, plastid	31.23	30.83
EER90755	Sorghum	cytosol	34.12	30.3
KXG24747	Sorghum	cytosol	28.08	29.89
EER99824	Sorghum	plastid	33.07	29.58
KXG34465	Sorghum	cytosol	33.86	29.25
KXG24406	Sorghum	cytosol	28.87	26.19
KXG25976	Sorghum	cytosol	8.14	25.62
KXG24338	Sorghum	cytosol	26.77	21.52

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8074733	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5YG82	EnsemblPlants:EES11459	ProteinID:EES11459	ProteinID:EES11459.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF224	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	EnsemblPlantsGene:SORBI_3006G222200	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0001A86FE0	RefSeq:XP_002447131.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56865093..56866238

Molecular Weight (calculated)

42016.1 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.124

Length

381 amino acids

Sequence
(BLAST)

001: MAGDTNSSSS ANPSLLPATS SRCLTHDYKV TNFSLLVGIG QVVASSTFSA GGCDWSIRFF PDGDNETPEE AASFTAVYLC LVAGPAGTRV RYKFTLLDDR
101: GRRVSTKTGK RRRRKKGKET AADLTRTSTS TYPYVGAMWG TNRFFDRSVL EELLRDSNDS FTIRCAVAVI RTRTEDDVVI EVPESVLRHD LARMLRDGDG
201: ADVTFIVGNR FFRAHRYVLA ARSMVFKAQL FGAMTKEAQQ QRGVDGARCI IKVDDMDPAA FAGLLHYIYT DSLADDCTAG RVVVAQHLLV AADRYGLDRL
301: RVLCEARLCG WIDVQSVATT LALAERHQCA KLREACLRFL SWPDMLRAAV KTEGFGHLIA SYPSVASDIL DKVVSARVDD H

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.