CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13596	Sorghum	mitochondrion	66.76	67.15
EES14743	Sorghum	cytosol, mitochondrion, plastid	53.58	51.94
KXG24752	Sorghum	cytosol	22.92	48.48
EES13585	Sorghum	cytosol, plastid	52.44	47.41
OQU80115	Sorghum	cytosol	47.28	47.14
EER87831	Sorghum	cytosol	46.42	45.76
KXG24756	Sorghum	cytosol	44.7	43.94
EES14736	Sorghum	cytosol	44.41	43.66
KXG24742	Sorghum	mitochondrion	44.7	43.21
EES14737	Sorghum	cytosol	43.84	43.1
EES08963	Sorghum	cytosol	46.42	42.63
EES14728	Sorghum	cytosol	42.98	42.37
EER99574	Sorghum	cytosol	44.13	42.19
OQU80118	Sorghum	cytosol	14.61	41.8
KXG24755	Sorghum	mitochondrion	44.99	41.76
KXG24747	Sorghum	cytosol	42.41	41.34
OQU80119	Sorghum	cytosol	43.84	40.37
OQU82372	Sorghum	plastid	33.81	34.6
KXG24406	Sorghum	cytosol	41.55	34.52
EES11455	Sorghum	cytosol	31.81	34.26
OQU82373	Sorghum	cytosol, plastid	32.95	33.92
KXG27151	Sorghum	plastid	36.39	32.9
EER97813	Sorghum	plastid	36.68	31.84
EES11459	Sorghum	plastid	34.67	31.76
EER99824	Sorghum	plastid	38.68	31.69
EER90755	Sorghum	cytosol	34.96	28.44
KXG34465	Sorghum	cytosol	35.82	28.34
KXG25976	Sorghum	cytosol	9.46	27.27
KXG24338	Sorghum	cytosol	35.82	26.37

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8073247	UniProt:A0A1Z5R8S3
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU80150	ProteinID:OQU80150	ProteinID:OQU80150.1
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G088800	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A87C23
RefSeq:XP_002444102.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:12350467..12351872

Molecular Weight (calculated)

38950.8 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.162

Length

349 amino acids

Sequence
(BLAST)

001: MSAAAERPST RIASMCAAAE TARVTHSFKV VGKSVHKGFA VGMSIRSATF SAGGHSWCIK YYPSGNADNC KNYASVFLEL VSKSTEATVL YDFRLVNQAT
101: GLSSSLFSSK AVFNDEKPTW GPRRFIIKSD LEASGYLKDD CLEIECDLTV IKVDEIDVPP PNLQDDLQKL LESEEGVDVT FKVKDEVFQA HRIVLAMRSP
201: VFKAELYGPM RNNKKGSIAV EDIEPPVFKA LLHFIYTDSL PIMNDLDAKD HHEMVKHLLV AADRYGLERM KLMCENILCK KLAIDSIATT IILADQYHCS
301: KLKDACFQFI NSSNRMDDVV ASQGYNDLKR ECPALTIEIW EKAAKSRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.