CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G059700.1	Wheat	cytosol	23.01	61.76
TraesCS5A01G452100.1	Wheat	cytosol	21.92	61.54
KXG24755	Sorghum	mitochondrion	62.47	60.64
EES14736	Sorghum	cytosol	58.36	60.0
EES14737	Sorghum	cytosol	58.08	59.72
HORVU5Hr1G108760.1	Barley	cytosol	55.62	59.53
TraesCS5D01G462100.1	Wheat	cytosol	58.08	59.22
TraesCS5B01G472700.1	Wheat	cytosol	57.26	59.21
TraesCS5B01G472100.1	Wheat	cytosol	56.99	58.92
KXG24756	Sorghum	cytosol	57.26	58.87
TraesCS5A01G462000.1	Wheat	cytosol	28.22	58.86
TraesCS5B01G460400.1	Wheat	cytosol	58.36	58.68
TraesCS2B01G074000.1	Wheat	cytosol	54.52	58.19
TraesCS2D01G059500.1	Wheat	cytosol	56.99	58.1
TraesCS5B01G472500.1	Wheat	cytosol	56.16	58.07
TraesCS5B01G460300.1	Wheat	cytosol	57.26	57.58
TraesCS5D01G461700.1	Wheat	cytosol	57.26	57.58
TraesCS5A01G451500.1	Wheat	cytosol	57.26	57.58
TraesCS5B01G460600.1	Wheat	cytosol	56.44	57.54
TraesCS5A01G451900.1	Wheat	cytosol	55.62	56.55
TraesCS5B01G472400.1	Wheat	cytosol	42.74	56.32
TraesCS5B01G472600.1	Wheat	cytosol	54.52	55.74
TraesCS5A01G461800.1	Wheat	cytosol	51.51	55.62
TraesCS7D01G148800.1	Wheat	cytosol	53.97	55.34
TraesCS7B01G049700.1	Wheat	cytosol	53.97	55.34
HORVU5Hr1G110530.1	Barley	cytosol	37.26	54.84
HORVU5Hr1G108800.1	Barley	cytosol	50.68	54.25
EER87831	Sorghum	cytosol	52.6	54.24
TraesCS5A01G451600.1	Wheat	cytosol	50.96	53.3
TraesCS3B01G507600.1	Wheat	cytosol	42.74	53.24
OQU80119	Sorghum	cytosol	52.6	50.66
KXG24747	Sorghum	cytosol	49.04	50.0
KXG24742	Sorghum	mitochondrion	48.22	48.75
KXG24752	Sorghum	cytosol	21.37	47.27
OQU80115	Sorghum	cytosol	45.21	47.14
EES14728	Sorghum	cytosol	44.93	46.33
OQU80118	Sorghum	cytosol	15.34	45.9
EES13596	Sorghum	mitochondrion	42.74	44.96
OQU80150	Sorghum	plastid	42.19	44.13
EES14743	Sorghum	cytosol, mitochondrion, plastid	42.47	43.06
EES08963	Sorghum	cytosol	41.92	40.26
EES13585	Sorghum	cytosol, plastid	41.1	38.86
OQU82373	Sorghum	cytosol, plastid	32.6	35.1
KXG27151	Sorghum	plastid	36.71	34.72
EES11455	Sorghum	cytosol	28.77	32.41
EER99824	Sorghum	plastid	37.26	31.92
KXG25976	Sorghum	cytosol	10.41	31.41
EER97813	Sorghum	plastid	34.52	31.34
OQU82372	Sorghum	plastid	29.04	31.09
EES11459	Sorghum	plastid	32.33	30.97
KXG24406	Sorghum	cytosol	35.62	30.95
EER90755	Sorghum	cytosol	35.89	30.54
KXG34465	Sorghum	cytosol	36.16	29.93
KXG24338	Sorghum	cytosol	35.07	27.0

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8056363	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5XBQ7	EnsemblPlants:EER99574	ProteinID:EER99574	ProteinID:EER99574.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3002G344900	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A842AB
RefSeq:XP_002463053.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:71117885..71119287

Molecular Weight (calculated)

40407.8 Da

IEP (calculated)

7.177

GRAVY (calculated)

-0.044

Length

365 amino acids

Sequence
(BLAST)

001: MPRHMRTTTV VSTCTPVTEE VRHVFEIVGY SKHRGMGHDG FIRSGTFSVG GHEWAIRFHP DGYCSSSGNV DTDFISVYLE LLDKGAKVRA SCDLSLVVQN
101: TGLSTSVHKT GPRIFHQGQS SAFAPQTNLF MKRNDLVASG YLQNDRLTIE CVVIVMMKPQ VATTGFLNNI GLPPSNIIEN LGSLLETEEG ADVRFSVGGE
201: TFAAHRLVLA MRSPVFKAEL YGTMMEGRSE LVTIQDMQPT VFRALLHFIY TDSLPDMVDH RGDAITEMIR HLIVAADRYA VDGLKLICQS ILCERLNVKD
301: VAITLALAYQ HNCDRLKDAC HEFLTASNSN VLDMVIATPG YKNLKTTCPS VLADAFEKAM KRRKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.