CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13596	Sorghum	mitochondrion	34.76	42.07
OQU80150	Sorghum	plastid	34.52	41.55
EES14743	Sorghum	cytosol, mitochondrion, plastid	35.24	41.11
OQU80115	Sorghum	cytosol	33.57	40.29
OQU80118	Sorghum	cytosol	11.43	39.34
KXG24742	Sorghum	mitochondrion	32.86	38.23
EES14728	Sorghum	cytosol	31.19	37.01
KXG24756	Sorghum	cytosol	30.95	36.62
EES13585	Sorghum	cytosol, plastid	33.57	36.53
EES14736	Sorghum	cytosol	30.71	36.34
EER87831	Sorghum	cytosol	30.24	35.88
KXG24752	Sorghum	cytosol	14.05	35.76
EER99574	Sorghum	cytosol	30.95	35.62
EES14737	Sorghum	cytosol	30.0	35.49
KXG24755	Sorghum	mitochondrion	31.19	34.84
EES08963	Sorghum	cytosol	31.43	34.74
OQU82373	Sorghum	cytosol, plastid	27.38	33.92
OQU80119	Sorghum	cytosol	29.52	32.72
KXG24747	Sorghum	cytosol	27.62	32.4
EER90755	Sorghum	cytosol	31.19	30.54
EER99824	Sorghum	plastid	30.95	30.52
KXG27151	Sorghum	plastid	27.38	29.79
EER97813	Sorghum	plastid	28.33	29.6
KXG25976	Sorghum	cytosol	8.33	28.93
EES11459	Sorghum	plastid	26.19	28.87
KXG34465	Sorghum	cytosol	30.24	28.8
OQU82372	Sorghum	plastid	23.33	28.74
EES11455	Sorghum	cytosol	22.14	28.7
KXG24338	Sorghum	cytosol	24.05	21.31

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PFF2	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG24406	ProteinID:KXG24406	ProteinID:KXG24406.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G037800	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00081AD1EE

Description

hypothetical protein

Coordinates

chr7:+:3685886..3690275

Molecular Weight (calculated)

47218.3 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.626

Length

420 amino acids

Sequence
(BLAST)

001: MASQARVRAS ASICSSVTDS ELHTLEISDY SQHSDLGDGG YISSTRFTVG GHDWRIRYYP DGIGNGEDCK DYVGVQLELM SEFTEVRLAY EFRLADDDDD
101: VAAIKSTTVL TAETSSTCGT DKFKKKSDLP RYLRNDSLKI QCFVTVFKES QLKEAAVSSN PVVDVQVPPS NLSSHLGKLL SPERKDGDIM FKVKTEEFRA
201: HKLILDIRCP ALKTTAATHT QPHFDGQTIM RDRRTTSGTD NSSTVVVIQD MEPKDFKALL HFIYTDSLPK EHRNNEEMAT NLLAAADKYD LTRMKLYCGN
301: ILSKRPTVDS VTTTIAQAHK HHCTELKDAC IKFINSSERT RDDVLSSEGY KELKATCPEV ALEILENSDI FKKAVERQQD VPEERSAGNH REARRGQGVS
401: RPRKYYPRNV ATTHWSSDEE

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.