CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14743	Sorghum	cytosol, mitochondrion, plastid	46.05	48.61
KXG24752	Sorghum	cytosol	20.26	46.67
OQU80150	Sorghum	plastid	42.63	46.42
EES13596	Sorghum	mitochondrion	42.11	46.11
KXG24742	Sorghum	mitochondrion	41.58	43.77
EES14736	Sorghum	cytosol	40.79	43.66
OQU80118	Sorghum	cytosol	13.95	43.44
OQU80115	Sorghum	cytosol	40.0	43.43
EES14737	Sorghum	cytosol	40.53	43.38
KXG24756	Sorghum	cytosol	39.74	42.54
EES14728	Sorghum	cytosol	39.21	42.09
EER99574	Sorghum	cytosol	40.26	41.92
EES13585	Sorghum	cytosol, plastid	40.79	40.16
TraesCS7D01G537000.1	Wheat	cytosol	29.47	39.72
OQU80119	Sorghum	cytosol	39.21	39.31
TraesCS7A01G550800.1	Wheat	cytosol	27.89	38.97
KXG24747	Sorghum	cytosol	36.58	38.83
EER87831	Sorghum	cytosol	35.79	38.42
Os08t0228200-00	Rice	mitochondrion	42.11	38.37
OQU82373	Sorghum	cytosol, plastid	33.95	38.05
KXG24755	Sorghum	mitochondrion	37.63	38.03
OQU82372	Sorghum	plastid	33.42	37.24
KXG27151	Sorghum	plastid	36.58	36.01
EES11455	Sorghum	cytosol	30.26	35.49
EES11459	Sorghum	plastid	33.95	33.86
EER97813	Sorghum	plastid	34.21	32.34
EER99824	Sorghum	plastid	35.53	31.69
EER90755	Sorghum	cytosol	35.53	31.47
KXG24406	Sorghum	cytosol	34.74	31.43
KXG25976	Sorghum	cytosol	10.0	31.41
KXG34465	Sorghum	cytosol	35.53	30.61
KXG24338	Sorghum	cytosol	34.74	27.85

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8082093	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5Y7W0	EnsemblPlants:EES08963	ProteinID:EES08963	ProteinID:EES08963.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3005G212300	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A86389
RefSeq:XP_002449975.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:69847214..69848356

Molecular Weight (calculated)

42168.9 Da

IEP (calculated)

7.134

GRAVY (calculated)

-0.086

Length

380 amino acids

Sequence
(BLAST)

001: MAASMVPAET RKITWRCSPD VDRCSHMFEI HGYTLQAEGL GVGKTVVRSA TFAVGGYDWS ISYYPDGYYG QESSGYASVY IDFMSNKTCP AGTKVSGHFR
101: FRLFNPATGE FRIMLGGYLP FKHTVNPNGS HAWGSAKFID RRWLQTSPYL CHDRLTIVCD LSVLVGSRVS GPESTETCEN EIIIEVPPSN LSENLEKLLD
201: MKEGADVTFK VKGVVFHAHK VVLAARSPVF KAELYGLIGE RKTCRHGHIA IQDMEPGVFK ALLHFIYTDS LPAANGDCDL DDEGVVKHLL VAADRYAMDR
301: MRLMCESMLC KRLDVDNVAA ILALADQHYC CKLKDACVSF MSSPKRIKDV MATQGYDHLK KACPSIVMNL LEESVKSSVC

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.