CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0226400-00	Rice	cytosol	59.28	58.63
KXG24752	Sorghum	cytosol	24.65	53.94
EES14728	Sorghum	cytosol	52.08	53.11
OQU80115	Sorghum	cytosol	50.69	52.29
OQU80118	Sorghum	cytosol	17.45	51.64
EER87831	Sorghum	cytosol	49.58	50.56
EES14736	Sorghum	cytosol	49.58	50.42
EES14737	Sorghum	cytosol	48.48	49.3
EES14743	Sorghum	cytosol, mitochondrion, plastid	49.03	49.17
KXG24755	Sorghum	mitochondrion	50.69	48.67
EER99574	Sorghum	cytosol	48.75	48.22
KXG24756	Sorghum	cytosol	47.37	48.17
KXG24747	Sorghum	cytosol	45.98	46.37
OQU80150	Sorghum	plastid	43.21	44.7
EES13596	Sorghum	mitochondrion	42.38	44.09
OQU80119	Sorghum	cytosol	44.88	42.74
EES08963	Sorghum	cytosol	43.77	41.58
EES13585	Sorghum	cytosol, plastid	44.04	41.19
KXG25976	Sorghum	cytosol	12.47	37.19
OQU82373	Sorghum	cytosol, plastid	34.9	37.17
OQU82372	Sorghum	plastid	34.9	36.95
EES11455	Sorghum	cytosol	31.3	34.88
KXG27151	Sorghum	plastid	37.12	34.72
EES11459	Sorghum	plastid	36.57	34.65
EER99824	Sorghum	plastid	40.17	34.04
KXG24406	Sorghum	cytosol	38.23	32.86
EER90755	Sorghum	cytosol	38.78	32.63
EER97813	Sorghum	plastid	36.01	32.34
KXG34465	Sorghum	cytosol	38.5	31.52
KXG24338	Sorghum	cytosol	35.73	27.22

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PGC3	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG24742	ProteinID:KXG24742	ProteinID:KXG24742.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF223	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3007G080500	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00081AE5E3	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:9559064..9562173

Molecular Weight (calculated)

40723.7 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.170

Length

361 amino acids

Sequence
(BLAST)

001: MRMSAVPKKT SSRCITVAET GSHTFEIVGY SLQKGTGVGK FVRSGTFTVG GYDWSIRFYP DGSSTDSEEY VTICLELMTS NATARASYHL RLASQQSPLC
101: WWGCKSGPRL FKSCDVTRFG PRNWDFILRC DLEEEESCYL VDDSIRIECE VTVIREPQLS ETRVESEIEV PPCDMMAHFG KLLEQKKGTD VSFIVGGDSF
201: EAHKIVLVAR SPVFMAEFYG RMRESGMCCV TVQDMQPDVF RALLHFIYTD SLPDMDDLDR DEYSEMIQHL LVASDRYAME RLKLMCQCIL RKNLDVETVA
301: TTLALADQQN CDELKAACIE FISSSRDVSA LVATQGYSSL KRSCPSVLVD LYEKTSKLFK T

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.