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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0226800-00 Rice cytosol 59.45 59.78
KXG24742 Sorghum mitochondrion 58.63 59.28
Os08t0227400-00 Rice cytosol 34.25 54.82
EES14728 Sorghum cytosol 52.6 54.24
Os08t0227200-02 Rice cytosol 47.67 49.01
Os08t0227100-01 Rice cytosol 47.67 45.08
Os08t0228200-00 Rice mitochondrion 43.56 38.13
Os08t0227500-00 Rice nucleus, plastid 7.4 38.03
Os04t0625400-00 Rice plastid 34.25 37.88
Os08t0128900-00 Rice cytosol, plastid 36.71 37.12
Os04t0625500-00 Rice plastid 37.53 36.53
Os04t0625600-01 Rice cytosol 37.26 34.87
Os07t0655300-01 Rice plastid 41.1 34.56
Os07t0167200-01 Rice cytosol 39.73 34.2
Os07t0101400-01 Rice cytosol 36.16 33.42
Os03t0792500-02 Rice cytosol 38.36 32.48
Os08t0129300-00 Rice cytosol 42.19 30.08
Os08t0128700-01 Rice cytosol 0.27 0.27
Os03t0792400-01 Rice plastid 0.0 0.0
Protein Annotations
Gene3D:1.25.40.420EntrezGene:107277132Gene3D:2.60.210.10Gene3D:3.30.710.10MapMan:35.1ProteinID:BAD03124.1
ProteinID:BAD03441.1ProteinID:BAT04404.1InterPro:BPM_CInterPro:BTB/POZ_domProteinID:EAZ41928.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR000210InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_dom
EnsemblPlantsGene:Os08g0226400EnsemblPlants:Os08t0226400-00PFAM:PF00651PFscan:PS50097PFscan:PS50144PANTHER:PTHR26379
PANTHER:PTHR26379:SF211UniProt:Q7F0Z3InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF49599SUPFAM:SSF54695
InterPro:TRAF-likeUniParc:UPI000022600ARefSeq:XP_015649524.1SEG:seg::
Description
MATH-BTB protein 19, MDC protein with a BTB domain 19, MDC protein having BTB domain 19Hypothetical conserved gene. (Os08t0226400-00)
Coordinates
chr8:+:7717968..7719211
Molecular Weight (calculated)
40475.3 Da
IEP (calculated)
4.974
GRAVY (calculated)
-0.117
Length
365 amino acids
Sequence
(BLAST)
001: MGTGSKKKKT VSWCTTEVSE GTHAFKIVGY SLNKGIGVGT FIRSGTFAVG GHDWAIRLYP DGVTEDSMDY VSVYLELMTE NAKAMAFYTL GLVDPVTGGI
101: RCNWSRSSPR LFDSSDSSRF GPRSPLFIPR SDLEMEESGY IVNDRLTVEC EVTVTKGPQV SRTIGCSEIG VPPSELSEHF GKLLEEEEDV GRDVVFSVEG
201: ESFAAHKLVL AARSPVFKAE FYGEMIERGT FSIDIKDMQP SVFRALLHFI YTDVLPADIG DLEGDDYVEF IRHLVVAADR YAMDRLKLMC QSILGKYVDV
301: KNVATTLALA DQHNCDKLKD VCIQYICSLD EVDAMVRTKG YANLKRSCPS VLADLFEKTS KFRAS
Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.